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scnpilot_p_inoc_scaffold_143_3

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(2792..3760)

Top 3 Functional Annotations

Value Algorithm Source
Fe2+-dicitrate sensor, membrane component n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J3FXS5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 314.0
  • Bit_score: 369
  • Evalue 3.40e-99
  • rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EUB74206.1}; TaxID=1144708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 314.0
  • Bit_score: 369
  • Evalue 4.70e-99
Fe2+-dicitrate sensor membrane protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 316.0
  • Bit_score: 366
  • Evalue 6.10e-99

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Taxonomy

Pseudomonas sp. GM41(2012) → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAACCGCGCCGCGCCGGGCGCGCCTATCGACCCCCGCATCCTGGAACAGGCTTCCGACTGGCTGGTGCAGCTCCATGGCGGCGGCATGACGGACGAAGCGCGCGCCGCCTTCCAGCGGTGGCGCCAGAGCGATCCCGAGCACGACCGCGCGTGGGCGCGGGCCGAGCTGCTGATGAACAAGCTCGGGGGTCTGCCGCCGTCGCTGGCGATGCCGTCGCTCGACCGGCCCGCGCGCAACGGCCGCCGTGCCGCGGTCGCCAGGCTGGCCATGCTGGCGGCCACGGTGCCGGCGGGCTGGGCGGCCTGGCAGGTGGCGCGCGAGGAGGGCTGGACGGCCGACCACCGGACCCGGACCGGCGAGCGGCGCGACCTGCGCCTGGCCGACGGCACCCGGCTGACGCTGAATACCGCCACCGCCATCGATGTGCGCTTCGACGCCATGCAGCGCCTGGTCCACTTGCGGGCGGGCGAGATCCTGATCCAGACGGCGCCCGACAGCGCGACGGTGCGCCGGCCTTTCCTGGTCGGCACCGGCGAAGGCCGCATGGAGGCCCTGGGCACGCGCTTCAGCGTCCGGCAGGACGAGGGCAGCACCACCGTTGCCGTGTTCGAGAGCGCAGTGCGAATCGAACCGCGCGGCGGCTCGCCCGCCGTGCTCGAGGCCGGGCACCGGGTCTCGTTCACCGCTGCCGGCCTGGCCGCGCCGGCGCCGGCCGACGAGGCCGCGATCGCCTGGACCCGGGGCATGTTGCTGGCCGACCGCATGCGGATGGCCGACGTCGTCGCCGAAGTCGCGCGGTACCGCGGCGGCATCGTGCGCTGCGATCCGGCCATCGCCGACCTTCCCGTTTCCGGCGCCTTCCCGCTCGCCGACACGGACCGCACGCTGGGCATGCTGGCCGCCACGTATCCGGTGCGGGCGGTGACGCGCGTGGGCGGGTACTGGGTCAGCGTCGTGCCCCGCTGA
PROTEIN sequence
Length: 323
MNRAAPGAPIDPRILEQASDWLVQLHGGGMTDEARAAFQRWRQSDPEHDRAWARAELLMNKLGGLPPSLAMPSLDRPARNGRRAAVARLAMLAATVPAGWAAWQVAREEGWTADHRTRTGERRDLRLADGTRLTLNTATAIDVRFDAMQRLVHLRAGEILIQTAPDSATVRRPFLVGTGEGRMEALGTRFSVRQDEGSTTVAVFESAVRIEPRGGSPAVLEAGHRVSFTAAGLAAPAPADEAAIAWTRGMLLADRMRMADVVAEVARYRGGIVRCDPAIADLPVSGAFPLADTDRTLGMLAATYPVRAVTRVGGYWVSVVPR*