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scnpilot_p_inoc_scaffold_143_4

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(3771..4274)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D2G8_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 3.60e-60
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EFI62675.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 159.0
  • Bit_score: 238
  • Evalue 5.00e-60
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 165.0
  • Bit_score: 236
  • Evalue 6.50e-60

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGTCCACGGCCCACCCCCGTTCCCGGGAAATCGAGGCACTCTACAGCGACCACCACGGCTGGCTGCATGCATGGCTGCGCGGGAAGCTCGGCAATTCCTTCGACGCGGCGGACCTGGCCCAGGACACCTTCGCCCGCGTGCTGGCCGGGCGCATGCCGGCCTCGCTGGTCGAGCCGCGCGCCTACCTGACCACCGTGGCCAAGGGCATCCTGGTCAACTGGTATCGGCGCCAGGCGCTCGAACGCGCGTACCTGGAGGCGCTCGCGGCGCTGCCCGAGCCGCAGGCCCCGGCACCCGAGCAGCGCGTCCTGATCCTGGAAACCCTGCACGAGATCGATGCCCTGCTCGACCGCCTGCCGCCTCAGGTCCGGCGGACCTTCCTGCTGTCGCAGATCGAGGGCATGAAGTACGACGACATCGCGCGGGCCACCGGCGTAGCGCTGGTTACCGTGAAGCGTCACATGAAGCAGGCGTTCTCGCACTGTCTGGCGGCGATCGAATAA
PROTEIN sequence
Length: 168
MSTAHPRSREIEALYSDHHGWLHAWLRGKLGNSFDAADLAQDTFARVLAGRMPASLVEPRAYLTTVAKGILVNWYRRQALERAYLEALAALPEPQAPAPEQRVLILETLHEIDALLDRLPPQVRRTFLLSQIEGMKYDDIARATGVALVTVKRHMKQAFSHCLAAIE*