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scnpilot_p_inoc_scaffold_156_38

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 43516..44262

Top 3 Functional Annotations

Value Algorithm Source
rsuA; RNA pseudouridylate synthase (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 248.0
  • Bit_score: 417
  • Evalue 3.10e-114
Pseudouridine synthase family protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2USW5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 248.0
  • Bit_score: 426
  • Evalue 2.30e-116
  • rbh
Pseudouridine synthase family protein {ECO:0000313|EMBL:EJL94197.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="H similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 248.0
  • Bit_score: 426
  • Evalue 3.30e-116

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGTCCGAACCCATCCGCCTGTCCAAACGCATGTCCGAACTGGGACTCTGCTCTCGCCGGGAGGCGGATGAATGGATCAGCCGCGGCTGGGTGCGCGTGGACGGCGCGGTGGTCTCGGTGCTGGGCAGCAAGGTGCTGCCCAGCCAGAAGGTCACCATCGAACGCCAGGCCAGCGCCGAACAGGCGCAGCGGGTCACGATCCTGCTGAACAAGCCGGTCGGCTACGTCAGCGGCCAGGCCGAGGACGGCTACCAGCCCGCCGTGACCCTGGTCAAGGCCAGCACCCGCTGGACCGGAGACCGCGCGCCCACCCGCTTCCAGCCCAGCCAGTTGCGCAGCCTGGTGCCGGCCGGCCGGCTGGATATCGATTCGGTCGGCCTGCTGGTCCTGACCCAGGACGGCCGCATCGCCAAGCACCTGATCGGCGAGGACTCCACCGTCGACAAGGAATACCTGGTGCGGGTCCAGTACACCCGTCCGGGGCGCCTGCCCGAGAGCGGCCTCAAGCTGCTCAACCACGGCCTCTCGCTGGACGGCAAGCCGCTGCGTCCGGCCGTGGTGCGCTGGCAGAACGACGACCAGTTGTCCTTCACCCTGCGCGAAGGCAAGAAACGCCAGATCCGCCGCATGTGCGAAGCCGTCGGCCTGCGCGTGGTGGGCCTCAAACGCGTCCGCATAGGCGGCGTCGCACTGGGCGACCTGCCGCCGGGACAGTGGCGGTACCTGCGGGAAGACGAACGGTTCTGA
PROTEIN sequence
Length: 249
MSEPIRLSKRMSELGLCSRREADEWISRGWVRVDGAVVSVLGSKVLPSQKVTIERQASAEQAQRVTILLNKPVGYVSGQAEDGYQPAVTLVKASTRWTGDRAPTRFQPSQLRSLVPAGRLDIDSVGLLVLTQDGRIAKHLIGEDSTVDKEYLVRVQYTRPGRLPESGLKLLNHGLSLDGKPLRPAVVRWQNDDQLSFTLREGKKRQIRRMCEAVGLRVVGLKRVRIGGVALGDLPPGQWRYLREDERF*