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scnpilot_p_inoc_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 314 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_156_1
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..210)
DNA (210bp) protein (70aa)
ferredoxin n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002DF4AB5
Flavodoxin reductase family protein {ECO:0000313|EMBL:EJL84622.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Her
putative oxygenase electron transfer component
scnpilot_p_inoc_scaffold_156_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275..1267)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KUK2_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_156_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1264..2520)
DNA (1257bp) protein (419aa)
Phthalate 4,5-dioxygenase oxygenase subunit {ECO:0000313|EMBL:GAO53302.1}; EC=1.14.12.7 {ECO:0000313|EMBL:GAO53302.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
phthalate 4,5-dioxygenase (EC:1.14.12.7)
Phthalate 4,5-dioxygenase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46RU1_CUPPJ rbh
scnpilot_p_inoc_scaffold_156_4
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2643..3578
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TI49_BURSG
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADN61910.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_p_inoc_scaffold_156_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3623..4552)
DNA (930bp) protein (310aa)
dihydrodipicolinate synthetase (EC:4.2.1.-); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Dihydrodipicolinate synthetase id=4141953 bin=GWA2_Methylomirabilis_73_35 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dihydrodipicolinate synthetase
scnpilot_p_inoc_scaffold_156_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4569..5402)
DNA (834bp) protein (278aa)
FCD domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZU4_9PROT
FCD domain protein {ECO:0000313|EMBL:EHM01342.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Ace
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_156_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5501..6625
DNA (1125bp) protein (375aa)
NAD(P) transhydrogenase alpha subunit (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XIA7_ALCXX rbh
NAD(P) transhydrogenase {ECO:0000313|EMBL:EFV83343.1}; NADP transhydrogenase subunit alpha {ECO:0000313|EMBL:AIR50756.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
scnpilot_p_inoc_scaffold_156_8
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6625..6954
DNA (330bp) protein (110aa)
NAD(P) transhydrogenase, subunit alpha part 2 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTW7_POLNA
NAD(P) transhydrogenase
NAD(P) transhydrogenase {ECO:0000313|EMBL:AJC21704.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.
scnpilot_p_inoc_scaffold_156_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6954..8387
DNA (1434bp) protein (478aa)
pntB; NAD(P) transhydrogenase subunit beta (EC:1.6.1.1)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HEK2_ACHXA rbh
scnpilot_p_inoc_scaffold_156_10

Not on your lists

comp(8430..9314)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AVR7_PSERE
Uncharacterized protein {ECO:0000313|EMBL:KKN91868.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_156_11
Brenneria sp. EniD312, Brenneria, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9318..10073)
DNA (756bp) protein (252aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Brenneria sp. EniD312 RepID=G7LVQ2_9ENTR
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EHD19960.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria
enoyl-CoA hydratase/isomerase
scnpilot_p_inoc_scaffold_156_12
Brenneria sp. EniD312, Brenneria, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10167..11690
DNA (1524bp) protein (508aa)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:EHD19962.1}; EC=6.2.1.26 {ECO:0000313|EMBL:EHD19962.1};; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
O-succinylbenzoate--CoA ligase n=1 Tax=Brenneria sp. EniD312 RepID=G7LVQ4_9ENTR
o-succinylbenzoate-CoA ligase
scnpilot_p_inoc_scaffold_156_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11738..12505
DNA (768bp) protein (256aa)
Putative IclR-family regulatory protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3K8B8_PSEFS
putative IclR family regulatory protein
Putative IclR-family regulatory protein {ECO:0000313|EMBL:CAY48443.1}; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
scnpilot_p_inoc_scaffold_156_14
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12517..13236)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002D33013
Uncharacterized protein {ECO:0000313|EMBL:KHQ98513.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
scnpilot_p_inoc_scaffold_156_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13260..14240)
DNA (981bp) protein (327aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9W3_BORPD
bug91; hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAP44514.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (s
scnpilot_p_inoc_scaffold_156_16
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14497..15108
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003619F20
ssuE; putative FMN reductase SsuE
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KHA76833.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthino
scnpilot_p_inoc_scaffold_156_17
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15128..16108)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BAU3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KHL53925.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campest
putative secreted protein
scnpilot_p_inoc_scaffold_156_18
Neisseria sp. oral taxon 014, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16144..17604)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Neisseria sp. oral taxon 014 str. F0314 RepID=D7N495_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EFI23257.1}; TaxID=641149 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. oral taxon 01
hypothetical protein
scnpilot_p_inoc_scaffold_156_19
unknown

Not on your lists

comp(17725..18564)
DNA (840bp) protein (280aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_156_20
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18677..21181)
DNA (2505bp) protein (835aa)
Putative lipoprotein n=1 Tax=Comamonas testosteroni S44 RepID=D8DE55_COMTE
Uncharacterized protein {ECO:0000313|EMBL:KGH31428.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
lipoprotein
scnpilot_p_inoc_scaffold_156_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21224..23989)
DNA (2766bp) protein (922aa)
HasR n=1 Tax=Comamonas testosteroni S44 RepID=D8DE54_COMTE
HasR {ECO:0000313|EMBL:EFI58772.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
hasR; TonB-dependent heme/hemoglobin receptor family protein
scnpilot_p_inoc_scaffold_156_22
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24093..25064)
DNA (972bp) protein (324aa)
Fec operon regulator FecR n=1 Tax=Serratia marcescens VGH107 RepID=M3CG32_SERMA
fecR; transmembrane signaltransducer for ferric citrate transport
Iron dicitrate transport regulator FecR {ECO:0000313|EMBL:KFF89802.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="S
scnpilot_p_inoc_scaffold_156_23
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25061..25564)
DNA (504bp) protein (168aa)
ECF sigma factor, FecI family n=3 Tax=Azotobacter vinelandii RepID=C1DFE8_AZOVD
ECF sigma factor, FecI family
ECF sigma factor, FecI family {ECO:0000313|EMBL:AGK20436.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter
scnpilot_p_inoc_scaffold_156_24
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25735..26721)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EH99_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE51671.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
putative BUG-like extracytoplasmic solute binding receptor, TTT family
scnpilot_p_inoc_scaffold_156_25
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26801..28252)
DNA (1452bp) protein (484aa)
doxF; salicylaldehyde dehydrogenase DoxF (EC:1.2.1.65)
Salicylaldehyde dehydrogenase DoxF {ECO:0000313|EMBL:AEI76414.1}; EC=1.2.1.65 {ECO:0000313|EMBL:AEI76414.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
salicylaldehyde dehydrogenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037483CF rbh
scnpilot_p_inoc_scaffold_156_26
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28296..29864)
DNA (1569bp) protein (523aa)
mdlC; benzoylformate decarboxylase MdlC (EC:4.1.1.7)
Benzoylformate decarboxylase MdlC {ECO:0000313|EMBL:AEI76413.1}; EC=4.1.1.7 {ECO:0000313|EMBL:AEI76413.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkho
Benzoylformate decarboxylase MdlC n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0F0C8_CUPNN
scnpilot_p_inoc_scaffold_156_27
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29983..30897
DNA (915bp) protein (305aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003637566 rbh
h16_A1112; LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:AEI76412.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
scnpilot_p_inoc_scaffold_156_28
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30887..32128)
DNA (1242bp) protein (414aa)
Glycolate dehydrogenase (EC:1.1.99.14)
Glycolate dehydrogenase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XHZ6_ALCXX rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Ac
scnpilot_p_inoc_scaffold_156_29
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32147..33232)
DNA (1086bp) protein (362aa)
Glycolate oxidase subunit {ECO:0000313|EMBL:CRD73630.1}; EC=1.-.-.- {ECO:0000313|EMBL:CRD73630.1};; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bo
Glycolate oxidase FAD binding subunit n=32 Tax=Bordetella RepID=F4L9M8_BORPC rbh
glcE; glycolate oxidase FAD binding subunit
scnpilot_p_inoc_scaffold_156_30
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33242..34738)
DNA (1497bp) protein (499aa)
Putative glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EFF76297.1}; EC=1.1.3.15 {ECO:0000313|EMBL:EFF76297.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
Putative glycolate oxidase, subunit GlcD n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XA32_9BURK rbh
Displaying items 1-30 of 314 in total

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