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scnpilot_p_inoc_scaffold_156

Search features with annotation key words

Displaying items 91-120 of 314 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_156_91
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(97353..98372)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E6F13
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIF16941.1}; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocaps
hypothetical protein
scnpilot_p_inoc_scaffold_156_92
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98425..99339)
DNA (915bp) protein (305aa)
sulfonate ABC transporter substrate-binding protein n=1 Tax=Saccharopolyspora erythraea RepID=UPI0001D310D3
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:CEL19584.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoc
ABC-type nitrate/sulfonate/bicarbonate transport systems-like protein
scnpilot_p_inoc_scaffold_156_93
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99457..100761)
DNA (1305bp) protein (435aa)
ndh; NADH dehydrogenase (EC:1.6.99.3) rbh
NADH dehydrogenase {ECO:0000313|EMBL:CAP44297.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CAP44297.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Borde
NADH dehydrogenase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I6E4_BORPD rbh
scnpilot_p_inoc_scaffold_156_94
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100823..102214)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4TC46_BORBO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ51293.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertus
scnpilot_p_inoc_scaffold_156_95
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102331..102945
DNA (615bp) protein (205aa)
UPF0307 protein BN115_4036 n=3 Tax=Bordetella bronchiseptica RepID=K0MN39_BORBM
hypothetical protein
UPF0307 protein L533_4707 {ECO:0000256|HAMAP-Rule:MF_00765}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bron
scnpilot_p_inoc_scaffold_156_96
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102959..103603
DNA (645bp) protein (215aa)
Molybdopterin biosynthesis enzymes n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WBN8_9BURK rbh
molybdenum cofactor synthesis domain protein
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:AJY13557.1}; Molybdopterin biosynthesis enzymes {ECO:0000313|EMBL:EAY69384.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteo
scnpilot_p_inoc_scaffold_156_97
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103632..104303
DNA (672bp) protein (224aa)
carboxylesterase (EC:3.1.2.-)
Probable carboxylesterase {ECO:0000313|EMBL:CAP40922.1}; EC=3.1.2.- {ECO:0000313|EMBL:CAP40922.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
Probable carboxylesterase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I227_BORPD rbh
scnpilot_p_inoc_scaffold_156_98
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104419..104907
DNA (489bp) protein (163aa)
Universal stress protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I4E2_BORPD
universal stress protein
Putative universal stress protein {ECO:0000313|EMBL:CAP40981.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella p
scnpilot_p_inoc_scaffold_156_99
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105048..105971)
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4YT92_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KGD90562.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_156_100
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106102..107061
DNA (960bp) protein (320aa)
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X3H6_VARPD
putative Bug-like extra-cytoplasmic solute receptor, TTT family
Putative Bug-like extra-cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU47467.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
scnpilot_p_inoc_scaffold_156_101
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107201..108148
DNA (948bp) protein (316aa)
DedA n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XW41_ALCXX rbh
DedA
DedA {ECO:0000313|EMBL:CCH06123.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NH44784-19
scnpilot_p_inoc_scaffold_156_102
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108145..108540
DNA (396bp) protein (132aa)
OsmC-like protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X7B9_9BURK
OsmC-like protein {ECO:0000313|EMBL:EFF77325.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii
hypothetical protein
scnpilot_p_inoc_scaffold_156_103
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108550..109470)
DNA (921bp) protein (307aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KJG8_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL80340.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
transcriptional regulator, LysR family
scnpilot_p_inoc_scaffold_156_104
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109547..110671
DNA (1125bp) protein (375aa)
Major facilitator superfamily MFS_1 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNP3_VARPS
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS19520.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
scnpilot_p_inoc_scaffold_156_105
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110846..111898
DNA (1053bp) protein (351aa)
bactoprenol glycosyltransferase (EC:2.-.-.-)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:KCB37956.1}; EC=2.4.-.- {ECO:0000313|EMBL:KCB37956.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Putative bactoprenol glycosyltransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I4B6_BORPD rbh
scnpilot_p_inoc_scaffold_156_106
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111895..113526
DNA (1632bp) protein (544aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:KCV63309.1}; EC=2.4.1.109 {ECO:0000313|EMBL:KCV63309.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria;
Putative membrane protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MMT3_BORBM rbh
hypothetical protein
scnpilot_p_inoc_scaffold_156_107
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113480..113875)
DNA (396bp) protein (132aa)
GtrA-like protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HFB4_ACHXA
Sugar translocase {ECO:0000313|EMBL:KGY29159.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans x
GtrA-like protein
scnpilot_p_inoc_scaffold_156_108
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113900..114718
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F7R0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHK65629.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsen
hypothetical protein
scnpilot_p_inoc_scaffold_156_109
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(114741..115685)
DNA (945bp) protein (315aa)
HTH-type transcriptional regulator soxR id=12555865 bin=CNBR_ACIDO species=Paenibacillus sp. JC66 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_156_110
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

115719..116936
DNA (1218bp) protein (406aa)
dctP; periplasmic protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Candidate periplasmic component id=4434774 bin=GWF2_Methylomirabilis_70_14 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic substrate binding protein
scnpilot_p_inoc_scaffold_156_111
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116943..117458
DNA (516bp) protein (172aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122C6_POLSJ
dctM; small permease Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
tripartite ATP-independent periplasmic transporter DctQ
scnpilot_p_inoc_scaffold_156_112
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117468..118778
DNA (1311bp) protein (437aa)
Candidate large permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XY36_RAMTT
fcbT3; large permease
Candidate large permease component {ECO:0000313|EMBL:AEG94361.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacte
scnpilot_p_inoc_scaffold_156_113
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118888..121074
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y3K3_RAMTT
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35406.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
scnpilot_p_inoc_scaffold_156_114
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121064..122584
DNA (1521bp) protein (507aa)
PorG, Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, gamma subunit n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J7M2_COMT2 rbh
PorG, Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
PorG, Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductases, gamma subunit {ECO:0000313|EMBL:ACY30762.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
scnpilot_p_inoc_scaffold_156_115
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122646..123077
DNA (432bp) protein (144aa)
thioesterase superfamily protein 2 (EC:3.1.2.-)
Thioesterase superfamily protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWN8_ACHXA
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35405.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
scnpilot_p_inoc_scaffold_156_116
unknown

Not on your lists

123442..123636
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_156_117
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123642..124898)
DNA (1257bp) protein (419aa)
Sigma-70 region 3 domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A459_STAND rbh
sigma-70 region 3 domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
sigma-70 region 3 domain-containing protein
scnpilot_p_inoc_scaffold_156_118
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(124957..125889)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RPN5_9RHIZ rbh
transcriptional regulator, GntR family/amidohydrolase family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
transcriptional regulator, GntR family/amidohydrolase family protein
scnpilot_p_inoc_scaffold_156_119
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125886..126863)
DNA (978bp) protein (326aa)
MFS transporter n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QU58_RALPI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
MFS transporter
scnpilot_p_inoc_scaffold_156_120
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126976..127896)
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia terrae BS001 RepID=I5CD28_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EIM93796.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
LysR family transcriptional regulator
Displaying items 91-120 of 314 in total

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