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scnpilot_p_inoc_scaffold_156_100

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 106102..107061

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X3H6_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 310.0
  • Bit_score: 471
  • Evalue 8.10e-130
putative Bug-like extra-cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 310.0
  • Bit_score: 471
  • Evalue 2.30e-130
Putative Bug-like extra-cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU47467.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 310.0
  • Bit_score: 471
  • Evalue 1.10e-129

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCTGAGACCCCTGCGCGCATTGGGCGCCCTCGCCCTGGCCGGCTCGTGCGCCAGCGCCTACGCCTGGCCCGACCACCCCATCACCTTCATCGTCCCCTACACCCCCGCCACCGGCATCGACCTCGTTGCCCGCCAGCTCTCCACCCAGCTCGGCAAGACCCTGGGCCAGCCCATCGTGGTCGAGAACGTGGCCGGCGCCAGCGGCAACATCGGCAGCGAACGCGCCGCCCGCGCCGCGCCCGACGGCTATACCTTCATGGTGCAGGTCAACACCCTGGTCATGAACCGCAGCCTGTACAAGTCGCTGCCCTACGACCCGGTGGCCGACTTCGACCCCGTGGCGCTGACCTCGTGGGGCACGCTGCTGCTGGTGTCGCCCACCTCGCGCAAGCCCGCCACCGTGGCCGAACTGGTAGCCGCGGCCAAGGCCGAACCCGGCAAGCTGACCTATGCCACCCCCGGCGTGGGCACGCCCCACCACCTGTACATGGCGCTGTTCCTGCAACAGACCGGCGCCGAGATGATGCACGTGCCCTACAAGGGTACGGCGGGCGCCGTCACCGACATCCTGGGCGGACGCATAGACGCGATGTTCCTGCCGGTGCACGTGGCCCTGCCGCAGATCAAGGGCGGCAAGCTCAAGGCCATCGCCACCGGCAGCGCGAAACGCCTGGTCCAGCTCCCCGGCGTGCCGACCCTCGAGGAAGCGGGCATCAAGGGCGGCAACGTGGACATGTGGTACGGCGTCTTCGCACCCAAGGGCACGCCACCCGACATCATCGCCCGCATGAACAAGGAGATCTCGCAGGCGCTGCAATCGCCCGCCACGGCTTCCGCCTTCGAGGCCCAGGGCATGGTGCCAGCCACCTCCTCGCCGGCCGAATTCGGCAAGCTCGTCGCCAAGGATGCCCAACGCTGGGCGGACGTGGTGAAGGCGGCGAACATCACCGCCGAATGA
PROTEIN sequence
Length: 320
MLRPLRALGALALAGSCASAYAWPDHPITFIVPYTPATGIDLVARQLSTQLGKTLGQPIVVENVAGASGNIGSERAARAAPDGYTFMVQVNTLVMNRSLYKSLPYDPVADFDPVALTSWGTLLLVSPTSRKPATVAELVAAAKAEPGKLTYATPGVGTPHHLYMALFLQQTGAEMMHVPYKGTAGAVTDILGGRIDAMFLPVHVALPQIKGGKLKAIATGSAKRLVQLPGVPTLEEAGIKGGNVDMWYGVFAPKGTPPDIIARMNKEISQALQSPATASAFEAQGMVPATSSPAEFGKLVAKDAQRWADVVKAANITAE*