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scnpilot_p_inoc_scaffold_156_200

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(224429..225349)

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=3 Tax=Bordetella RepID=Q7WC66_BORPA similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 295.0
  • Bit_score: 308
  • Evalue 8.70e-81
  • rbh
LysR substrate-binding domain protein {ECO:0000313|EMBL:KCV64362.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 295.0
  • Bit_score: 309
  • Evalue 5.50e-81
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 295.0
  • Bit_score: 308
  • Evalue 2.50e-81

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGCCAGACCCGGTGATCCGATCTCCTCGGTCAACCTGAAACTGCTGCATACCTTCATGCTGGTCGGCGAAAGCCGCAGCTTCCGTACCGCTGCCGGACGGGCCCACCGATCCGGTTCGGCGGTCAGCGGCCAGATCCGCCGCCTGGAAGAACAACTGGGAGTGCCGCTGTTCCATCGCACCACGCGCCAGGTCACGCTGACGCGCGAAGGCGAGCAACTGCTCCAGTGCGTTCGACGCGCCCTGCAGGAGGTGGAGGGCGGATTGCAGGCGATCCAGGAGGCCGCCGACGTCCAGCGCGGGCGCATCGCGCTGGCCTGCGCGCCCACTATCGCCGGTGCCTACCTGGGCGACGTGCTGGCGGCTTTCCAGGGCCAGTACCCAGGTATCCAGGTCTTCGTGCGCGAGATCACCGCGGCGGCGCTGTTCGAAAGCGTCAGGCAGCGGGAAGTCGATTTCGGCATCAGCGTGATGACCGGTTCGCCCGAGTTCCGCTTCGAGCCCCTGCTGACCGATGAACTGGTCGCGCTGGTGCCTCGCGCGCTGCTGGAGGGCGATCGCAAGACCATTTCGCTCAAGGCCCTGGCGGCCATGCCTCTGCTGGTGCTGGAACAGGGCACCGCGTTGCGCACCCTCGTCGAGGAAGCGATGGCCGCGCAAGGGCTCCACCTGGCCACGCGCTTCCAGTTCATGCATTCGCAGACGCTGATATCGATGGCGACGGCCGGCCTGGGCGCTGCCATCCTGCCGGCGACCGCGCTGCCGCGCACGCTCGGCGCCGGCGTCCAGAAGCTGCGCATCGTCCGTCCGACCCTGGTTCGCAGCATCGCGCTCGTGACGCTGCCTGGCCACGCGTTGTCGCCGGCTGCGTTGAAACTCGTGGACATGCTGCGCAGCATCCTGGCCCAGGCCCGGGCCTAG
PROTEIN sequence
Length: 307
MARPGDPISSVNLKLLHTFMLVGESRSFRTAAGRAHRSGSAVSGQIRRLEEQLGVPLFHRTTRQVTLTREGEQLLQCVRRALQEVEGGLQAIQEAADVQRGRIALACAPTIAGAYLGDVLAAFQGQYPGIQVFVREITAAALFESVRQREVDFGISVMTGSPEFRFEPLLTDELVALVPRALLEGDRKTISLKALAAMPLLVLEQGTALRTLVEEAMAAQGLHLATRFQFMHSQTLISMATAGLGAAILPATALPRTLGAGVQKLRIVRPTLVRSIALVTLPGHALSPAALKLVDMLRSILAQARA*