ggKbase home page

scnpilot_p_inoc_scaffold_265_7

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 6723..7217

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector, Hcp1 family n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I064_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 164.0
  • Bit_score: 242
  • Evalue 2.40e-61
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:EIT69356.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga. similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 164.0
  • Bit_score: 242
  • Evalue 3.40e-61
type VI secretion system effector similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 166.0
  • Bit_score: 168
  • Evalue 2.10e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCATTCGATGCATTCATCCAGCTTGAAGGGATCAAGGGAGAAAGCACGGACGAGAAGCACAAGGACTGGATCGAGATCCAGAACTACGGCTTCGGCGCGGCCCAGCCCCAGTCGAACACCGCATCGTCGTCGGGCAACCTCGGGTCGGCGCGGGTCGAGGTGAAGAACTTCAGCTTCCTGCACAACCTGGACATCGCCAGCCCCAAGCTGTTCGAATACTGCTGCACCGGGGCCACGATTCCCAAGGCGACCATCACCCTGAACCGCGCCGGCGGCCAGAAAGAGAAGTACATGGAGTACAAGCTGACTGACGTGATCGTGACTTCGGTCAATCGTGACGGCGCCGCCGACAACACGCAGGACGTGCCGCTGGAAGCCGTTGCGCTGGGCTTCGGCAAGATCGAGATGACCTACAGCAAGATCGGCATCGACGGGAAATCCTCCGGCAACGCATCCGCCGGCTGGGACCTGAAGAAGAACGTAAAGGTGTGA
PROTEIN sequence
Length: 165
MAFDAFIQLEGIKGESTDEKHKDWIEIQNYGFGAAQPQSNTASSSGNLGSARVEVKNFSFLHNLDIASPKLFEYCCTGATIPKATITLNRAGGQKEKYMEYKLTDVIVTSVNRDGAADNTQDVPLEAVALGFGKIEMTYSKIGIDGKSSGNASAGWDLKKNVKV*