ggKbase home page

scnpilot_p_inoc_scaffold_265

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_265_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2735
DNA (2733bp) protein (911aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I061_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69351.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
ImcF-like N-terminal domain-containing protein
scnpilot_p_inoc_scaffold_265_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2752..3852
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCE5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69352.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
impA; ImpA-like N-terminal family protein
scnpilot_p_inoc_scaffold_265_3
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3858..4145)
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Pusillimonas noertemannii RepID=UPI00037F7998
Putative transcriptional regulator {ECO:0000313|EMBL:EJC65794.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligen
transcriptional regulator
scnpilot_p_inoc_scaffold_265_4
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4135..4443)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000361E9B8
Uncharacterized protein {ECO:0000313|EMBL:EJC65793.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis
hypothetical protein
scnpilot_p_inoc_scaffold_265_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4668..5186
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBU1_9GAMM
Type VI secretion protein {ECO:0000313|EMBL:AKC85912.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxant
hypothetical protein
scnpilot_p_inoc_scaffold_265_6
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5213..6700
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5X7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69355.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
type VI secretion protein EvpB
scnpilot_p_inoc_scaffold_265_7
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6723..7217
DNA (495bp) protein (165aa)
Type VI secretion system effector, Hcp1 family n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I064_9GAMM
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:EIT69356.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.
type VI secretion system effector
scnpilot_p_inoc_scaffold_265_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7253..7684
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T6J4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69358.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
scnpilot_p_inoc_scaffold_265_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7677..9551)
DNA (1875bp) protein (625aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI00037851EF
histidine kinase
scnpilot_p_inoc_scaffold_265_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9676..10734
DNA (1059bp) protein (353aa)
phosphonate ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036E02FA
phosphonate ABC transporter periplasmic phosphonate-binding protein
Phosphonate ABC transporter, periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ACS17175.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
scnpilot_p_inoc_scaffold_265_11
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10815..12692
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCC4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69332.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
scnpilot_p_inoc_scaffold_265_12
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12803..14635
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T6G7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69333.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
scnpilot_p_inoc_scaffold_265_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14640..15719
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5V9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC85905.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
evpG; type VI secretion system protein EvpG
scnpilot_p_inoc_scaffold_265_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15710..18361
DNA (2652bp) protein (884aa)
Type VI secretion ATPase, ClpV1 family n=1 Tax=Pseudomonas sp. GM74 RepID=J3H8P3_9PSED rbh
ATPase AAA {ECO:0000313|EMBL:AKC85904.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonen
clpB1; ATP-dependent Clp protease ATP-binding subunit
scnpilot_p_inoc_scaffold_265_15
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18367..20637
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCC9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69337.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
ImpA family type VI secretion-associated protein
scnpilot_p_inoc_scaffold_265_16
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20641..21264
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T6H2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69338.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
scnpilot_p_inoc_scaffold_265_17
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21464..23677
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBS8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT69339.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
scnpilot_p_inoc_scaffold_265_18
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23693..24082)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E3G6_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV30355.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodoco
hypothetical protein
scnpilot_p_inoc_scaffold_265_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24121..24738)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I054_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69341.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
putative outer membrane protein, OmpA family
scnpilot_p_inoc_scaffold_265_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24949..26073
DNA (1125bp) protein (375aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000367F136
ABC transporter periplasmic protein
ABC-type uncharacterized transport system periplasmic component-like protein {ECO:0000313|EMBL:ACS17172.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
scnpilot_p_inoc_scaffold_265_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26092..27990
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
Integral membrane sensor hybrid histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5G1_VARPE rbh
integral membrane sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_265_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27987..35168)
DNA (7182bp) protein (2394aa)
hemagglutinin n=1 Tax=Variovorax paradoxus RepID=UPI0003757F84
Variovorax paradoxus strain MEDvA23 contig_98, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20301.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
putative filamentous hemagglutinin family protein
scnpilot_p_inoc_scaffold_265_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35237..36877)
DNA (1641bp) protein (547aa)
Hemolysin activation/secretion protein n=1 Tax=Variovorax sp. CF313 RepID=J2KER3_9BURK
Hemolysin activation/secretion protein {ECO:0000313|EMBL:EJL78705.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
polypeptide-transport-associated domain-containing protein shlb-type
scnpilot_p_inoc_scaffold_265_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36881..39001)
DNA (2121bp) protein (707aa)
Tetratricopeptide domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJG5_VARPS rbh
hypothetical protein
Tetratricopeptide domain protein {ECO:0000313|EMBL:ACS17165.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
scnpilot_p_inoc_scaffold_265_25
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39125..40027
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QNL0_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:EIG61366.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_265_26
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40032..40823)
DNA (792bp) protein (264aa)
Alpha/beta hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I111_AZOC5
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:BAF87319.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodan
scnpilot_p_inoc_scaffold_265_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(40823..42025)
DNA (1203bp) protein (401aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sulfurtransferase id=2937757 bin=GWC2_Methylomirabilis_70_16 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sseA; 3-mercaptopyruvate sulfurtransferase
scnpilot_p_inoc_scaffold_265_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42029..43003)
DNA (975bp) protein (325aa)
Extra-cytoplasmic solute receptor protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKP0_9BURK
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:EIK89780.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="
bug61; hypothetical protein
scnpilot_p_inoc_scaffold_265_29
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43035..43541)
DNA (507bp) protein (169aa)
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKP1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGT79669.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japoni
aromatic-ring-hydroxylating dioxygenase subunit beta
scnpilot_p_inoc_scaffold_265_30
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43555..44808)
DNA (1254bp) protein (418aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKP2_9BURK
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EIK89782.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=
Rieske (2Fe-2S) domain-containing protein
Displaying items 1-30 of 153 in total

View Taxonomy