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scnpilot_p_inoc_scaffold_271_9

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 3956..4828

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Bordetella avium (strain 197N) RepID=RS3_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 266.0
  • Bit_score: 426
  • Evalue 1.60e-116
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzi similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 266.0
  • Bit_score: 428
  • Evalue 7.70e-117
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 266.0
  • Bit_score: 426
  • Evalue 4.50e-117

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Taxonomy

Bordetella sp. 8-296-03 → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGGGACAGAAAATTCACCCGACCGGGTTCCGTCTCTCGGTCAGCCGTAACTGGTCTTCCCGCTGGTACGCCAGCGGAAGCGCCTACGCCAACATGCTGGCGGAAGACATCAAGGTTCGCGAATACCTGAAGAAGAAGCTGAAAGGCGCTTCGGTGGGTCGCGTGATCATCGAGCGTCCTGCCAAGAACGCGCGTGTCACGGTCTACTCGGCTCGTCCGGGTGTCGTGATCGGCAAGAAAGGCGAGGACATCGAGATCCTGAAGGCCGATCTGCAGCGTCTGATGGGCGTGCCCGTGCACGTCAACATCGAAGAGATCCGCAAGCCGGAAATCGACGCCCAGCTGATCGCCGACTCGATCGCCCAGCAGCTCGAAAAGCGCATCATGTTCCGCCGCGCGATGAAGCGCGCCATGCAGAACGCGATGCGCCTGGGTGCCCAGGGCATCAAGATCATGAGCGCCGGCCGCCTGAACGGCATCGAAATCGCCCGTACCGAGTGGTATCGCGAAGGCCGTGTGCCGCTGCACACCCTGCGCGCCAACATCGATTACGGTACTTCCGAAGCCGGCACGACCTATGGCCTGATCGGCATCAAGGTCTGGGTCTACAAGGGCGACACGCTGGGCTCGGCCGAACTGGCCGCCGCTCAGGAAGCAACCAAAGACGAAGAGCGCAAACCGCGTCGCGGTCCGCGTAACGATCGTGGCGATCGTCCGGGCAATAATCGCCCCGGCGCCGGCCGTGGTCGTGGCGGCCGTCGCCCCGAAGGCGAGGCAGCTGCTGCCGCGCCGGAAGGTGGCGCCCGGCGTGCGCCGCGCAAGCCGGCTGCTGACGCAGCTGCCGCGCCTGCGCCTGCAAAAGACGGAGAATAA
PROTEIN sequence
Length: 291
MGQKIHPTGFRLSVSRNWSSRWYASGSAYANMLAEDIKVREYLKKKLKGASVGRVIIERPAKNARVTVYSARPGVVIGKKGEDIEILKADLQRLMGVPVHVNIEEIRKPEIDAQLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRANIDYGTSEAGTTYGLIGIKVWVYKGDTLGSAELAAAQEATKDEERKPRRGPRNDRGDRPGNNRPGAGRGRGGRRPEGEAAAAAPEGGARRAPRKPAADAAAAPAPAKDGE*