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scnpilot_p_inoc_scaffold_271_10

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 4831..5247

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=2 Tax=Bordetella holmesii RepID=M5NM83_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 138.0
  • Bit_score: 267
  • Evalue 7.70e-69
rplP; ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 138.0
  • Bit_score: 267
  • Evalue 2.20e-69
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordet similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 138.0
  • Bit_score: 267
  • Evalue 1.10e-68

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCTGCAGCCATCGCGCAGGAAATACCGTAAGGAACAAAAAGGCCGCAATACGGGCCTGGCCACGCGCGGCGCCAATGTCTCGTTCGGCGAATTCGGTCTGAAGGCCACCGGTCGTGGCCGCCTGACCGCTCGCCAGATCGAATCGGCCCGTCGTGCCATCACCCGCCACATCAAGCGTGGCGGCCGTATCTGGATCCGCGTCTTCCCCGACAAGCCGATCTCGCAGAAGCCCGCCGAAGTCCGTATGGGTAACGGCAAGGGCAACCCCGAGTACTGGGTCGCCGAGATCCAGCCCGGCAAAGTGCTGTATGAAATGGAAGGCGTCAACGAAGAACTGGCGCGCGAGGCGTTCCGCCTGGCGGCTGCCAAGCTTCCGATCTCGACCGTCTTCGTGACGCGTCATCTCGGAACGTAA
PROTEIN sequence
Length: 139
MLQPSRRKYRKEQKGRNTGLATRGANVSFGEFGLKATGRGRLTARQIESARRAITRHIKRGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYWVAEIQPGKVLYEMEGVNEELAREAFRLAAAKLPISTVFVTRHLGT*