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scnpilot_p_inoc_scaffold_340_26

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(31079..31948)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MKW7_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 265.0
  • Bit_score: 334
  • Evalue 1.10e-88
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bord similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 271.0
  • Bit_score: 338
  • Evalue 8.00e-90
comL; competence lipoprotein similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 265.0
  • Bit_score: 334
  • Evalue 3.00e-89

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGCAGTTGAATTCCCTGGCAATGCAAGCGGCCTGCGGGCATGTGGCCCCGGTCCGGCGGCAGAGCCTCGTCACGCGGCTGGGCCTGGCCCTGGCCTGCCTGCTGGCCTTTTTCGTCCTGGCGGGCTGCGCCAATACCGGCAAGGAACCCGACCCCACGGTGGGCTGGACTGCCGAAAGATTGTACAAGGAGGCCAAGGACGAGATGGACACCGGCAACTGGACTCAGGCGGCCAAGTTGCTGGAAAAACTCGAATCGCGCTATCCGTTCGGCGTCTTTGCCCAGCAGGCGCAGATCGACATCGCCTACGTCTACTGGAAGGACGGCTCCAACGCCCAGGCCCTGGCCGCGATCGACCGCTTCGAGCGCCTGCACCCCAACCACCCCAGCCTGGACTACATGCTCTACCTGAAGGGGTTGATCAACTTCTACCAGGACAGCGCCTTCCTGGCCGGCCTGACGCGGCAGGACCCCAGCGAGCGCGACCCCAAGGGCGCGCGCGAATCGTTCGACGCGTTCAAGAGCCTGGTCGCCCGCTTCCCCGACAGCAAGTACGCGCCCGACGCTCGCCTGCGGCTGAACTACCTCGTCAACTCCATCGCGATGAACGAGGTCCACGTCGCCCGCCTGTACCTGGATCGCGGCGCCTACGTGGCCGCGGTCAACCGCGCGCAGACCGCCGTGCGCGACTTCCAGGGCGCCCCCGCGGTCGAGGAAGCGCTCTACATCATGGTGCTGGCCTACGACAAGATGGGCATGACCGACCTGCGCGACGATGCCTCGCGCGTGCTGAGCGCGAACTATCCCGACAGCACCTTCGTCAAGAGCGGCTTCCAGAAGGAAAGCGGCCCGTGGTGGAAGATCTGGTAA
PROTEIN sequence
Length: 290
MQLNSLAMQAACGHVAPVRRQSLVTRLGLALACLLAFFVLAGCANTGKEPDPTVGWTAERLYKEAKDEMDTGNWTQAAKLLEKLESRYPFGVFAQQAQIDIAYVYWKDGSNAQALAAIDRFERLHPNHPSLDYMLYLKGLINFYQDSAFLAGLTRQDPSERDPKGARESFDAFKSLVARFPDSKYAPDARLRLNYLVNSIAMNEVHVARLYLDRGAYVAAVNRAQTAVRDFQGAPAVEEALYIMVLAYDKMGMTDLRDDASRVLSANYPDSTFVKSGFQKESGPWWKIW*