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scnpilot_p_inoc_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_340_1
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..306
DNA (306bp) protein (102aa)
IclR family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SGP6_9BURK
IclR family transcriptional regulator {ECO:0000313|EMBL:EHP38307.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
Transcriptional regulator, IclR family
scnpilot_p_inoc_scaffold_340_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(327..1196)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJ28_ACHXA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP16770.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylos
scnpilot_p_inoc_scaffold_340_3
unknown

Not on your lists

comp(1344..1454)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_340_4
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1633..1845)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FPT9_DESHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL19753.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense
scnpilot_p_inoc_scaffold_340_5
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1850..2596)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GE15_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF06323.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium metallire
scnpilot_p_inoc_scaffold_340_6
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(2620..4698)
DNA (2079bp) protein (693aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035FAA4E rbh
TonB-dependent receptor
Tax=BJP_IG2102_ACD39_51_10
scnpilot_p_inoc_scaffold_340_7
unknown

Not on your lists

comp(4707..5273)
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:CPR17670.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
id=4128433 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
scnpilot_p_inoc_scaffold_340_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5384..7804)
DNA (2421bp) protein (807aa)
ATP-dependent DNA ligase clustered with Ku protein, LigD {ECO:0000313|EMBL:CCU62204.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CCU62204.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria;
ATP-dependent DNA ligase clustered with Ku protein, LigD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI13_9PROT rbh
ATP-dependent DNA ligase
scnpilot_p_inoc_scaffold_340_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..8695)
DNA (870bp) protein (290aa)
Probable DNA repair protein Tbd_2246 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGP8_THIDA rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vario
Ku-like DNA-end-binding protein
scnpilot_p_inoc_scaffold_340_10
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8807..9901
DNA (1095bp) protein (365aa)
AFG1-like ATPase family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T3Q3_ALCXX rbh
AFG1-like ATPase family protein {ECO:0000313|EMBL:EGP45074.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobac
hypothetical protein
scnpilot_p_inoc_scaffold_340_11
unknown

Not on your lists

comp(9917..10276)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_340_12
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10273..11271)
DNA (999bp) protein (333aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FDC43
Tricarboxylate transport protein TctC
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23314.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_340_13
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11296..13056)
DNA (1761bp) protein (587aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QDK1_ACIAP
scnpilot_p_inoc_scaffold_340_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13059..15128)
DNA (2070bp) protein (690aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RBG_16_Betaproteobacteria_64_18_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QDK2_ACIAP
scnpilot_p_inoc_scaffold_340_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15288..16139
DNA (852bp) protein (284aa)
Transcriptional regulator, IclR family n=1 Tax=Rhodovulum sp. PH10 RepID=J6UE76_9RHOB
transcriptional regulator, IclR family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_340_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16281..18647)
DNA (2367bp) protein (789aa)
Transcription accessory protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IIW4_BORPD rbh
Transcription accessory protein {ECO:0000313|EMBL:CAP42183.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pet
tex; transcription accessory protein
scnpilot_p_inoc_scaffold_340_17
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

18703..19476
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Eimeria mitis RepID=U6JY66_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ30354.1}; TaxID=44415 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeri
hypothetical protein
scnpilot_p_inoc_scaffold_340_18
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19476..19679
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VXG0_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
scnpilot_p_inoc_scaffold_340_19
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19676..21772
DNA (2097bp) protein (699aa)
ATP-dependent helicase n=31 Tax=Bordetella RepID=F4LG98_BORPC rbh
ATP-dependent helicase
Helicase C-terminal domain protein {ECO:0000313|EMBL:KCB37110.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
scnpilot_p_inoc_scaffold_340_20
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21778..23448)
DNA (1671bp) protein (557aa)
Peptidase M30, hyicolysin n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1D5_DELSC
peptidase M30, hyicolysin
Peptidase M30, hyicolysin {ECO:0000313|EMBL:AEF87258.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1
scnpilot_p_inoc_scaffold_340_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23457..25106)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W4T2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD34683.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
peptidase M30, hyicolysin
scnpilot_p_inoc_scaffold_340_22
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25141..26847)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R6M2_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ70598.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
scnpilot_p_inoc_scaffold_340_23
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26860..28530)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R6M2_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ70598.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
scnpilot_p_inoc_scaffold_340_24
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28664..30409
DNA (1746bp) protein (582aa)
Two-component hybrid sensor and regulator n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SYK8_JANMA rbh
his Kinase A domain protein
His Kinase A domain protein {ECO:0000313|EMBL:AJZ57368.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia f
scnpilot_p_inoc_scaffold_340_25
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30430..31065)
DNA (636bp) protein (212aa)
DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SW03_JANMA
citB1; LuxR family transcriptional regulator
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:ABR89974.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" s
scnpilot_p_inoc_scaffold_340_26
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31079..31948)
DNA (870bp) protein (290aa)
Outer membrane protein assembly factor BamD n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MKW7_BORPB
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bord
comL; competence lipoprotein
scnpilot_p_inoc_scaffold_340_27
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32017..33027
DNA (1011bp) protein (337aa)
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
Pseudouridine synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IIW7_BORPD rbh
scnpilot_p_inoc_scaffold_340_28
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33024..33782
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZSM9_9RHOO
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P
hypothetical protein
scnpilot_p_inoc_scaffold_340_29
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33822..34046)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM92_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI76393.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
scnpilot_p_inoc_scaffold_340_30
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34191..35903
DNA (1713bp) protein (571aa)
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:CCN24207.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCN24207.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alc
Poly-beta-hydroxybutyrate polymerase n=6 Tax=Bordetella bronchiseptica RepID=K0MKX2_BORBM rbh
phbC; poly-beta-hydroxybutyrate polymerase
Displaying items 1-30 of 90 in total

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