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scnpilot_p_inoc_scaffold_340

Search features with annotation key words

Displaying items 61-90 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_340_61
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


71461..71820
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=3 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XXC5_ALCXX
LSU ribosomal protein L20p
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achrom
scnpilot_p_inoc_scaffold_340_62
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


71975..72994
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU13_PUSST rbh
phenylalanyl-tRNA synthetase alpha chain
scnpilot_p_inoc_scaffold_340_63
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


72994..75453
DNA (2460bp) protein (820aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IPT4_BORPD rbh
scnpilot_p_inoc_scaffold_340_64
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75475..75861
DNA (387bp) protein (129aa)
Integration host factor subunit alpha n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VZX4_9BURK
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=937450 species="Bacteria; Proteobacter
Integration host factor alpha subunit
scnpilot_p_inoc_scaffold_340_65
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75870..76271
DNA (402bp) protein (134aa)
MerR family transcriptional regulator n=1 Tax=Achromobacter piechaudii HLE RepID=J4YCR7_9BURK
MerR family transcriptional regulator {ECO:0000313|EMBL:EJO28771.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achr
transcriptional regulatory protein
scnpilot_p_inoc_scaffold_340_66
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76300..78996)
DNA (2697bp) protein (899aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Pyruvate dehydrogenase E1 component (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS48_9BURK rbh
scnpilot_p_inoc_scaffold_340_67
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79120..79599
DNA (480bp) protein (160aa)
AsnC family transcriptional regulator
Transcriptional regulator id=1268651 bin=GWE1_Burkholderiales_65_30 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
AsnC family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_p_inoc_scaffold_340_68
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80190..82115
DNA (1926bp) protein (642aa)
PrkA family serine protein kinase n=1 Tax=Achromobacter piechaudii HLE RepID=J4QML3_9BURK rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:KGY28181.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes
serine/threonine protein kinase
scnpilot_p_inoc_scaffold_340_69
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82127..83386
DNA (1260bp) protein (420aa)
UPF0229 protein BN117_3943 n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MN55_BORPB rbh
UPF0229 protein L493_4288 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bron
hypothetical protein
scnpilot_p_inoc_scaffold_340_70
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83383..84918
DNA (1536bp) protein (512aa)
SpoVR family protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1I0_ALCXX rbh
SpoVR family protein {ECO:0000313|EMBL:EGP45848.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavi
FIG004684: SpoVR-like protein
scnpilot_p_inoc_scaffold_340_71
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84925..85242)
DNA (318bp) protein (106aa)
NIPSNAP family containing protein n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UFX3_ADVKW
NIPSNAP family containing protein
NIPSNAP family containing protein {ECO:0000313|EMBL:AFK63911.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis
scnpilot_p_inoc_scaffold_340_72
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85259..85774)
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002E58C43 rbh
fabA; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
scnpilot_p_inoc_scaffold_340_73
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85820..86788)
DNA (969bp) protein (323aa)
Putative membrane protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T511_BORBO rbh
Fatty acid hydroxylase family protein {ECO:0000313|EMBL:KCB34672.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordete
hypothetical protein
scnpilot_p_inoc_scaffold_340_74
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86775..87581)
DNA (807bp) protein (269aa)
Putative polysaccharide deacetylase n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XMM5_ALCXX rbh
putative polysaccharide deacetylase
Putative polysaccharide deacetylase {ECO:0000313|EMBL:AHC44810.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achrom
scnpilot_p_inoc_scaffold_340_75
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87565..88557)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F9U8_9BURK rbh
Lactonase, 7-bladed beta-propeller domain protein {ECO:0000313|EMBL:KCV63745.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou
hypothetical protein
scnpilot_p_inoc_scaffold_340_76
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88735..89904)
DNA (1170bp) protein (390aa)
Putative ABC transporter substrate binding protein n=1 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=Q5GRB8_ALCXX rbh
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:CAI47851.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" s
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_340_77
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89992..91032)
DNA (1041bp) protein (347aa)
Rieske (2Fe-2S) domain-containing protein (EC:1.14.13.82)
Rieske (2Fe-2S) region {ECO:0000313|EMBL:ABE42947.1}; EC=1.14.13.82 {ECO:0000313|EMBL:ABE42947.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F18B57 rbh
scnpilot_p_inoc_scaffold_340_78
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91189..91857
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DE3D49
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABE42946.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaro
scnpilot_p_inoc_scaffold_340_79
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92131..92454
DNA (324bp) protein (108aa)
UPI0003D60AE8 related cluster n=1 Tax=unknown RepID=UPI0003D60AE8
Uncharacterized protein {ECO:0000313|EMBL:AHC47287.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylo
hypothetical protein
scnpilot_p_inoc_scaffold_340_80
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92536..93252
DNA (717bp) protein (239aa)
methyltransferase n=1 Tax=Pseudomonas psychrophila RepID=UPI00031CE888
Mg2+ transport ATPase {ECO:0000313|EMBL:EOA02561.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum fri
methyltransferase
scnpilot_p_inoc_scaffold_340_81
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93259..93642)
DNA (384bp) protein (128aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4YPX1_9PROT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
scnpilot_p_inoc_scaffold_340_82
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93882..94427
DNA (546bp) protein (182aa)
Transcriptional regulator, PadR-like family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKL6_BEII9
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACB95055.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="B
scnpilot_p_inoc_scaffold_340_83
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94463..95278
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030FC63E rbh
iron-chelator utilization protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23204.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
scnpilot_p_inoc_scaffold_340_84
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95283..96194
DNA (912bp) protein (304aa)
aldose 1-epimerase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0003757E84 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR82816.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
scnpilot_p_inoc_scaffold_340_85
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96199..97182)
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQ70_DELSC rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
scnpilot_p_inoc_scaffold_340_86
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97288..98481)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H282_PSEAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM65752.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
hypothetical protein
scnpilot_p_inoc_scaffold_340_87
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98586..99383
DNA (798bp) protein (266aa)
Putative transcriptional regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P376_AROAE rbh
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CAI08238.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum a
scnpilot_p_inoc_scaffold_340_88
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99428..100336
DNA (909bp) protein (303aa)
Putative Permeases of the DMT superfamily n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I4G0_BORPD
DMT superfamily permease
Putative Permeases of the DMT superfamily {ECO:0000313|EMBL:CAP40987.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bord
scnpilot_p_inoc_scaffold_340_89
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100372..101010)
DNA (639bp) protein (213aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound o
FMN-dependent NADH-azoreductase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSN6_AZOS1
acpD; FMN-dependent NADH-azoreductase
scnpilot_p_inoc_scaffold_340_90
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101160..102071
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037ACD01 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHP41567.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
Bacterial regulatory helix-turn-helix , lysR family protein
Displaying items 61-90 of 90 in total

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