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scnpilot_p_inoc_scaffold_340

Search features with annotation key words

Displaying items 31-60 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_340_31
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35968..36705
DNA (738bp) protein (246aa)
Acetoacetyl-CoA reductase (EC:1.1.1.36)
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:CDM25009.1}; EC=1.1.1.36 {ECO:0000313|EMBL:CDM25009.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
3-ketoacyl-ACP reductase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031C499F
scnpilot_p_inoc_scaffold_340_32
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36812..37378
DNA (567bp) protein (189aa)
Uncharacterized protein n=38 Tax=Bordetella RepID=F4LGA4_BORPC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE41448.1}; TaxID=257313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis (
scnpilot_p_inoc_scaffold_340_33
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37461..38846
DNA (1386bp) protein (462aa)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Ralstonia solanacearum (strain GMI1000) RepID=RIMO_RALSO rbh
putative 2-methylthioadenine synthetase
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_0186
scnpilot_p_inoc_scaffold_340_34
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38854..39618)
DNA (765bp) protein (255aa)
IclR helix-turn-helix domain protein 5 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HWG3_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:KJC40213.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_340_35
R_NC10_66_22, NC10, Bacteria

Not on your lists

39744..40853
DNA (1110bp) protein (370aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1); K06446 acyl-CoA dehydrogenase [EC:1.3.99.-] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLW7_DESK7
scnpilot_p_inoc_scaffold_340_36
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40850..42232
DNA (1383bp) protein (461aa)
MmgE/PrpD family protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FGB5_DESAA
MmgE/PrpD family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
scnpilot_p_inoc_scaffold_340_37
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42322..44007
DNA (1686bp) protein (562aa)
5-oxoprolinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYZ7_9BURK rbh
5-oxoprolinase
5-oxoprolinase {ECO:0000313|EMBL:AFU46057.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_340_38
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44004..46052
DNA (2049bp) protein (683aa)
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Acidovorax sp. CF316 RepID=J0KSS6_9BURK rbh
5-oxoprolinase
5-oxoprolinase {ECO:0000313|EMBL:AFU46058.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_340_39
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46114..47094
DNA (981bp) protein (327aa)
ABC transporter substrate-binding protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMB0_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETF01086.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashm
hypothetical protein
scnpilot_p_inoc_scaffold_340_40
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47106..47978
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX15_PELBH rbh
amidohydrolase; K07045 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
amidohydrolase
scnpilot_p_inoc_scaffold_340_41
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47975..49456
DNA (1482bp) protein (494aa)
Acyl-CoA synthase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX11_PELBH rbh
Acyl-CoA synthase {ECO:0000313|EMBL:EAU48391.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (s
AMP-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_340_42
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49723..50667)
DNA (945bp) protein (315aa)
PREDICTED: probable RuBisCO transcriptional regulator-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C118AA
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCD00227.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source=
scnpilot_p_inoc_scaffold_340_43
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50781..51722
DNA (942bp) protein (314aa)
SMP-30/Gluconolaconase/LRE-like region family protein 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJC6_ACHXA rbh
Gluconolactonase {ECO:0000313|EMBL:KGY26887.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xy
SMP-30/gluconolaconase/LRE-like region family protein 3
scnpilot_p_inoc_scaffold_340_44
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51719..52684
DNA (966bp) protein (322aa)
Extra-cytoplasmic solute receptor family protein 125 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJC5_ACHXA rbh
extra-cytoplasmic solute receptor family protein 125
Extra-cytoplasmic solute receptor family protein 125 {ECO:0000313|EMBL:ADP18025.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
scnpilot_p_inoc_scaffold_340_45
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52687..53349
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KG94_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76360.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
hypothetical protein
scnpilot_p_inoc_scaffold_340_46
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53324..53977)
DNA (654bp) protein (218aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3D6A3_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL85451.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_340_47
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54037..54897)
DNA (861bp) protein (287aa)
serB1; phosphoserine phosphatase SerB 1 (EC:3.1.3.3)
Phosphoserine phosphatase SerB 1 {ECO:0000313|EMBL:ADP14812.1}; EC=3.1.3.3 {ECO:0000313|EMBL:ADP14812.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcalige
Phosphoserine phosphatase SerB 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HS20_ACHXA rbh
scnpilot_p_inoc_scaffold_340_48
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54927..58412)
DNA (3486bp) protein (1162aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=340100 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9II42_BORPD rbh
mfd; transcription-repair coupling factor
scnpilot_p_inoc_scaffold_340_49
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58482..59210
DNA (729bp) protein (243aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MLE9_BORBM
ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
scnpilot_p_inoc_scaffold_340_50
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59207..59758
DNA (552bp) protein (184aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bordetella avium (strain 197N) RepID=ISPF_BORA1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
scnpilot_p_inoc_scaffold_340_51
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59784..60878
DNA (1095bp) protein (365aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:AGU48879.1}; EC=3.5.4.4 {ECO:0000313|EMBL:AGU48879.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
Adenosine deaminase n=1 Tax=Variovorax paradoxus B4 RepID=T1X965_VARPD
scnpilot_p_inoc_scaffold_340_52
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60884..61861
DNA (978bp) protein (326aa)
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8K0_VARPD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS86886.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C
putative Bug-like extracytoplasmic solute binding receptor, TTT family
scnpilot_p_inoc_scaffold_340_53
Pseudomonas lutea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62209..62673
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0003109899
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KGF65828.1}; TaxID=243924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas lutea
2Fe-2S iron-sulfur cluster binding domain-containing protein
scnpilot_p_inoc_scaffold_340_54
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62682..64862
DNA (2181bp) protein (727aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00031DC234 rbh
iorB; Twin-arginine translocation pathway signal Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
isoquinoline 1-oxidoreductase
scnpilot_p_inoc_scaffold_340_55
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64912..65640)
DNA (729bp) protein (243aa)
Aldolase domain-containing protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U946_ALCXX rbh
Ribulose-5-phosphate 4-epimerase
Aldolase domain-containing protein {ECO:0000313|EMBL:EFV84535.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromob
scnpilot_p_inoc_scaffold_340_56
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65689..66681)
DNA (993bp) protein (331aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I656_BORPD rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KCB35669.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
bug86; hypothetical protein
scnpilot_p_inoc_scaffold_340_57
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66830..68146
DNA (1317bp) protein (439aa)
Citrate synthase n=1 Tax=Burkholderia sp. BT03 RepID=J3BQJ7_9BURK
citrate synthase Tax=RBG_16_Betaproteobacteria_64_18_curated
citrate synthase
scnpilot_p_inoc_scaffold_340_58
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68382..70331
DNA (1950bp) protein (650aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=38 Tax=Bordetella RepID=SYT_BORBR rbh
scnpilot_p_inoc_scaffold_340_59
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70482..70982
DNA (501bp) protein (167aa)
Translation initiation factor IF-3 n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E3HJW3_ACHXA
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
scnpilot_p_inoc_scaffold_340_60
Taylorella asinigenitalis, Taylorella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


71234..71431
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Taylorella asinigenitalis RepID=G4Q9D6_TAYAM
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1091495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Taylor
Displaying items 31-60 of 90 in total

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