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scnpilot_p_inoc_scaffold_340_48

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(54927..58412)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=340100 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 999.99
  • Bit_score: 1823
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9II42_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 999.99
  • Bit_score: 1823
  • Evalue 0.0
  • rbh
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 999.99
  • Bit_score: 1823
  • Evalue 0.0

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3486
ATGTCCCTCCCAGCCAGTACCGCCTCCACGTCCTCCCCTTCCGCCAGCACGCCCGCCGCCTGCCTGCCTTCGGCGTTGACGCAAGCCGTGCTGGCCGCGCTTCGGCCCGGCGAACGCTATGCCCAGCCCCGCCCCCCGGGTGCCGGCGACGCCTGGCTGCTGGCCGACCTGGCGCGCCGCGCCGGCAAGCCGCTGGTCGTGCTGACGGCCGACCCGCTCGACGCCCAGCGCCTGGCCGAGGAAATCCGCCTGTTCTCCCCCGGCCTGCGGGTGCACCAGTTCCCCGATTGGGAAACCCTGCCCTACGACGCGTTCTCGCCCCACGAAGACCTGATCTCCGAGCGCCTGAAGGCCTTGCACGCCCTGCTGCGCCAGGACGTGGACGTCCTGACGATACCGGTCACGACCGCGCTGTACCGGCTGGCCCCGCCCGCGTTCCTGGCGGCCTATACGTTCTCGTTCAAGCAGGGCGACCGGCTGGACGAGGCCGCGCTGCGCGCGCAGTTGACCCTGGCCAACTACACGCACGTCACGCAGGTGACCGCGCCGGGCGAGTTCTGCATCCGCGGCAGCCTGATCGACCTTTTCCCCATGGGCTCGGCCCTGCCCTACCGGCTGGACCTGTTCGACGACACCATCGAGTCCATCCGCAGCTTCGACATCGACACCCAGCGCAGCCTCTATCCCGTCAAGGAGATCCAGATGCTGCCGGGCCGCGAGTTCCCGATGGACGAGGCCGCGCGCAACGAATTCCGCGCGCGCTTCCGCGAGGAATTCGAGGGCGACCCCTCGCGCGCCACGCCCTACAAGGACATCGGCAACGGCATCGCCTTCCCGGGCGTCGAATACTACCTGCCGCTGTTCTTCGACGACACCGCCACGCTGTTCGACTACCTGGGCGAGCACACCATCGCGGTCACGCTGGGCGACGCCGAGGACACCATCCGGCGCTTCCTGCAGGACACCTCCAGCCGCTACGAGTTCCTCAAGAGCGACCGCGAGCGCCCCATCCTGCCCCCGTCACGGATCTTCCTGGACACCGATGGCCTGTTCGGCCACCTGAAACGCTTCGCCCGCCTGGCCCTGGCCGGCGACCGCCCGCACCCAGCCTTCACCGCGCCGCCCGAGGTCGCCGTGCAGCGCAAGGCCGAGGATCCGGTGGCGCGCCTGCGCGCGCTGACGGCCCGGCAGGACCAGCGGGTGCTGCTGTGCGCCGAGTCGGCCGGCCGCCGCGAGACCATCGCCCAGATGCTGGCCGAATTCGGGCTGGACCCCGAACCGGTCGAGTCCGTGCAGGACTTCCTGGGCCGGACCTCGTCCTTCGCGATCGGCATCGCGCCGCTGTCCTCGGGCTTCGGCCTGGTCGACCCCAAGCTGCTGTTCCTGACCGAGAGCGACCTGTTCTCGGGCCATGCCGTCCGTCGCGGCAAGCGCGGCCAGGAACGGGCCAGCAACGTCGAGTCCATGGTGCGGGACCTGTCCGAACTGCGCGTGGGCGACCCGGTCGTCCACGTCCAGCACGGCATCGGCCGCTACCAGGGCCTGGTCAGCATGGACATCGGCGAAGGCGAGATGGAGTTCCTGCACCTGGAGTACGCCGGCGGCAGCACGCTGTACGTGCCGGTGTCGCAGTTGCACGTGATCGCGCGCTACAGCGGCGCCGACCCCGATACCGCGCCGCTGCACCAGCTCGGCTCCGGCCAGTGGGAGAAGGCCCGCCGCAAGGCCGCCGCCCAGGCCCGCGACGCCGCCGCCGAGCTGCTGAACCTGTACGCCCGCCGCGCCCTGCGCCAGGGCCACATGTTCAAACTGCCCATGTCCGACTACGAAGCCTTCGCCGAAACCTTCGGCTTCGAGGAGACGCCGGACCAGGCCGCCGCCATCCAGGCCGTGATCCAGGACATGATCTCGGGCAAGCCCATGGACCGGCTGGTGTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCGCTACGCGCCGCCTTCATCGCCGTGGCCAACAGCAAGCAGGTCGCGCTGCTGTGCCCCACCACGCTGCTGGCCGAGCAGCACGCGCAGAACTTCGCCGACCGCTTCGCCGACTGGCCCGTGCGCGTGGTCGAGCTGTCCCGCTTCAAGTCGGCCAAGGACATCAGCGCGTCCATCGAGCAGATCAACGACGGCCGGGTCGACATCGTCATCGGCACGCACAAGCTGCTGTCGGACAAGGTCAGGTTCAAGAACCTCGGCCTGGTCATCATCGACGAGGAACACCGCTTCGGCGTGCGCCAGAAAGAAGCGCTCAAGGCACTGCGCGCCGAGGTCGACGTGCTGACGCTGACCGCCACGCCCATTCCCCGCACGCTGGGCATGTCGCTGGAAGGCATACGCGATTTCTCGGTCATCGCCACCGCGCCGCAGAAGCGGCTGGCGATCAAGACCTTCGTGCGGCGCGAAGACGGCAGCACCATACGCGAGGCCCTGCTGCGCGAACTCAAGCGCGGCGGCCAGGTGTACTTCCTGCACAACGAGGTCGAGACCATCCACAACCGCCGCGCCAAGCTCGAGGAACTGGTGCCCGAGGCGCGCATCGCGGTCGCACACGGGCAGATGCCCGAACGCGAGCTGGAGCAGGTCATGAAGGCCTTCTACCAGCAGAAGTACAACGTGCTGCTTTGCACCACCATCATCGAGACCGGCATCGACGTGCCCACGGCCAACACCATCGTGCTGCATCGCGCCGACCGCTTCGGCCTGGCCCAGTTGCACCAGTTGCGCGGCCGCGTCGGACGCTCCCACCACCAGGCCTACGCCTACCTGCTGACGCCGGGCGAGGACGCCATCACCAGCAACGCCAAGAAGCGCCTGGAAGCCATCCAGGCCATGGAGGAACTGGGCTCGGGCTTCTACCTCGCGATGCACGACCTGGAGATACGCGGCGTGGGCGAGGTGCTGGGCGAATCGCAGTCGGGCAACATCCAGGAAGTCGGCTTCCAGATGTACACCGACATGCTGAACGAGGCGGTCCGGGCCCTGAAGAACGGCCGCGAACCCGATCTGAACGCCCCGCTGTCGGCCACCACCGAGATCAACCTGCACGTGCCCGCCCTGCTACCTCAGGACTATTGCGGCGACGTGCATGCGCGCCTGACGATCTACAAGCGCCTGGCCAACTGCGAGGACGCCGCCGACATCGACACGATCCAGGAAGAGCTGATCGACCGTTTCGGCAAGCTGCCCGAGGCGGCGCGCGCCCTGATCGAAATCCACCGGCTGCGCCTGGCGGCCAAGTCGGTGGGCGTGATCAAGATCGATGCCAGCGAATCGGCCGCCGTGCTGCAGTTCGAGCCGAATCCCCCCATCGATCCGATGCGCGTGATCAGCCTGGTCCAGAAGAACCGCCACATGCGTCTGTCGGGCCAGGACAAGCTGCGCATCGAGATCAAGGGCGCCGACCTGAAGGCGCGCGTGGACGCCGTGCGCACGGTGCTTCGCTCGCTGGTCTGA
PROTEIN sequence
Length: 1162
MSLPASTASTSSPSASTPAACLPSALTQAVLAALRPGERYAQPRPPGAGDAWLLADLARRAGKPLVVLTADPLDAQRLAEEIRLFSPGLRVHQFPDWETLPYDAFSPHEDLISERLKALHALLRQDVDVLTIPVTTALYRLAPPAFLAAYTFSFKQGDRLDEAALRAQLTLANYTHVTQVTAPGEFCIRGSLIDLFPMGSALPYRLDLFDDTIESIRSFDIDTQRSLYPVKEIQMLPGREFPMDEAARNEFRARFREEFEGDPSRATPYKDIGNGIAFPGVEYYLPLFFDDTATLFDYLGEHTIAVTLGDAEDTIRRFLQDTSSRYEFLKSDRERPILPPSRIFLDTDGLFGHLKRFARLALAGDRPHPAFTAPPEVAVQRKAEDPVARLRALTARQDQRVLLCAESAGRRETIAQMLAEFGLDPEPVESVQDFLGRTSSFAIGIAPLSSGFGLVDPKLLFLTESDLFSGHAVRRGKRGQERASNVESMVRDLSELRVGDPVVHVQHGIGRYQGLVSMDIGEGEMEFLHLEYAGGSTLYVPVSQLHVIARYSGADPDTAPLHQLGSGQWEKARRKAAAQARDAAAELLNLYARRALRQGHMFKLPMSDYEAFAETFGFEETPDQAAAIQAVIQDMISGKPMDRLVCGDVGFGKTEVALRAAFIAVANSKQVALLCPTTLLAEQHAQNFADRFADWPVRVVELSRFKSAKDISASIEQINDGRVDIVIGTHKLLSDKVRFKNLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPQKRLAIKTFVRREDGSTIREALLRELKRGGQVYFLHNEVETIHNRRAKLEELVPEARIAVAHGQMPERELEQVMKAFYQQKYNVLLCTTIIETGIDVPTANTIVLHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITSNAKKRLEAIQAMEELGSGFYLAMHDLEIRGVGEVLGESQSGNIQEVGFQMYTDMLNEAVRALKNGREPDLNAPLSATTEINLHVPALLPQDYCGDVHARLTIYKRLANCEDAADIDTIQEELIDRFGKLPEAARALIEIHRLRLAAKSVGVIKIDASESAAVLQFEPNPPIDPMRVISLVQKNRHMRLSGQDKLRIEIKGADLKARVDAVRTVLRSLV*