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scnpilot_p_inoc_scaffold_340_50

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 59207..59758

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 160.0
  • Bit_score: 274
  • Evalue 2.40e-71
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bordetella avium (strain 197N) RepID=ISPF_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 160.0
  • Bit_score: 274
  • Evalue 8.40e-71
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 159.0
  • Bit_score: 277
  • Evalue 1.10e-71

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Taxonomy

Bordetella sp. 8-296-03 → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAACCAAGACAAGGACATCGATCCCACCACCTATCCCTACCGCATCGGGCAGGGCTATGACGTACACGCGCTGGTCGAAGGGCGGCCGCTGATCATAGGCGGGGTCCGGATCGAGCACACGCACGGCCTCCTGGGCCATTCCGACGCCGACGTGCTGCTGCACGCGGTCACCGACGCCATCCTGGGCGCGGCGGGGCTGGGCGACATCGGCCGCCATTTTCCCGATACCGATCCCGCCTATGCCGGCGCCGACAGCCGGCTGCTGCTGCGCACCGCGATGCAGCGGGTGCGTGAGGCGGGCTGGCAGGTCATCAACGTCGACGCGACGGTCCACGCCCAGGCGCCCAAGATCGGCCCCCACGCACCGGCCATGGTCGCCAACATCGCCCAGGACCTGGGCGTGCCCGGGGCTTGCGTCAACATCAAGGCCAAGACCAACGAGGCCCTGGGTTTCCTGGGGCGCAAGGAAGGCATCGCCGCGACCGTGGTCGCGATGCTGGCGCGCAAGCCCGATCCTTTCCTGTACAAGGACCTGTACGCGGGGGATTGA
PROTEIN sequence
Length: 184
MNQDKDIDPTTYPYRIGQGYDVHALVEGRPLIIGGVRIEHTHGLLGHSDADVLLHAVTDAILGAAGLGDIGRHFPDTDPAYAGADSRLLLRTAMQRVREAGWQVINVDATVHAQAPKIGPHAPAMVANIAQDLGVPGACVNIKAKTNEALGFLGRKEGIAATVVAMLARKPDPFLYKDLYAGD*