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scnpilot_p_inoc_scaffold_340_52

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 60884..61861

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extracytoplasmic solute binding receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8K0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 326.0
  • Bit_score: 347
  • Evalue 1.40e-92
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS86886.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 323.0
  • Bit_score: 366
  • Evalue 3.10e-98
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 326.0
  • Bit_score: 347
  • Evalue 3.90e-93

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Taxonomy

Cupriavidus sp. SK-4 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGACCGCCATACGACGTGCTTTCCTTGTTTCGGCTGTGGCGCTGGGATGCGCCGCCACCGCGCAGGCCCAGTCCCCCTGGCCGGCCAAGCCCATTCGCCTGATCGTGCCGTTCACGGCCGGCGGCAGTACCGACGGCATCGCGCGCCTGGTGGCGCAGAAGCTGGGCGAACGCCTGGGGCAGTCGGTCATCGTCGACAACGTCGGCGGCGGGGGAGGGACCATAGGCACCTACCGGGCGGCGCAGGCCGAGCCGGACGGCTACACGCTGCTGCTGGGCGTCGACAGCCCGGCGGCCATCGCGCAGTACGTCAATCCCCAGTCGGTCAAGTACGACACCGCGCGCGACCTGGCCGCCATCGGACTCATCGCGACCCAGCCCATGGTCATCATGGGCCGCCCGGGCCTGCCGGCGGATTCCTTCGCCAAGGTGCTGGAGATGGCCAAGGCCCAGCCCGACACGCTGACCTACGCCACCTCGGGCATAGGCACCGTGCTGCACCTGGCCATGGAAATCATCCAGCAGCAGGCCCAGGTGCGGCTGCGCCACGTGCCTTACCGCGGTGGCGCCCAGGCCACCACCGACCTGCTGGGCAACCAGGTCGACCTGGCTATCCTGGCCTCGGGTTCAGCGGTGCCGCTGGTGGCTGCGAAGAAGGTGAAGGGCCTGGCTGTGACCACCGCCCAGCGCGTGCCCACGCTGCCCGAGGTGCCCGCCATCGGCGAGCTGCCGGCCCTGAAGGGCATGGCGATGACGGCGTGGATCGGCCTGTTCGCGCCTGCGCGCACGCCGGCCAACGTGGTCGCCAGGCTGAACCAGGAGCTGAACCAGGTCCTGCAGCAGCCCGAGGTCAAGGCCAAGTTCGCCGAACAGTCCGTGGCGCCGGGTACCGGCAGCGCCGCGCAGTTCAGCGATTTCGTGAAGAAGGAACAGGCGCGCTATCAGCGCATCGTAAAGAACGCGAACATCAAGGAATGA
PROTEIN sequence
Length: 326
MTAIRRAFLVSAVALGCAATAQAQSPWPAKPIRLIVPFTAGGSTDGIARLVAQKLGERLGQSVIVDNVGGGGGTIGTYRAAQAEPDGYTLLLGVDSPAAIAQYVNPQSVKYDTARDLAAIGLIATQPMVIMGRPGLPADSFAKVLEMAKAQPDTLTYATSGIGTVLHLAMEIIQQQAQVRLRHVPYRGGAQATTDLLGNQVDLAILASGSAVPLVAAKKVKGLAVTTAQRVPTLPEVPAIGELPALKGMAMTAWIGLFAPARTPANVVARLNQELNQVLQQPEVKAKFAEQSVAPGTGSAAQFSDFVKKEQARYQRIVKNANIKE*