ggKbase home page

scnpilot_p_inoc_scaffold_340_9

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(7826..8695)

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Tbd_2246 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGP8_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 269.0
  • Bit_score: 382
  • Evalue 4.50e-103
  • rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vario similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 277.0
  • Bit_score: 390
  • Evalue 2.30e-105
Ku-like DNA-end-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 269.0
  • Bit_score: 382
  • Evalue 1.30e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCCTCCACGGCACGCACACTCTGGAAAGGCGCCATCAGTTTCGGCCTGGTTCACATTCCGGTGGCGCTGTACACCGCCACCCAGGAAAACGAACTGGACTTCGACTGGCTGGACAAGCGCAGCATGGACCCGGTGGGCTACAAACGCGTCAACAAGCGCACCGGCCGCGAGATCGCGCGCGAGAACATCGTCAAGGGCATCGCCTATGAAGACGGCCGCTACGTCGTGCTGTCCGACGACGAGATACGCGCCGCCTATCCCGAATCGACGCAAACCATAGAGATCGAGACCTTCGTCGCGGCCGACGCCATTCCGTTCGTCTATCTCGAACGCCCCTATTACCTGGCGCCCCTGGGCAAAGGCGCCAAGGTCTACGCGCTGCTGCGCGAGGCGCTGTTCAAGACCGGGCGGATAGGCGTGGCGCGCGTGGTCATCCAGACCAAGCAGCACCTGGCCGCGCTGATTCCCGCCGGGCCCGGCCTGGTCCTGAACCTGCTGCGCTGGGGCGACGAAATCCGTTCGTGGGAGAACCTCGACCTGCCCGAGGAAGGCAGCCACGCCGAAGGTATCTCGGCGCGCGAAATGAAGATGGCCGTCCAGTTGATCGAAGACATGGCGGGCGACTGGGATCCCCGGCAGTTCCACGACGAGTTCAAGGAAAAGATCCTGCAACTGGTGCAGGCCAGGATCCAAGCCGACGAAACCCAGGCCGTCACCCCCATCGAGTCCATGGAGGAAGCCCGCCCCACCGCTGACATCGTGGACCTGACGGAACTGCTCAAGCGCAGCCTGGACAAGAACAAGGGCGGCGGTGGCGCCAGCGGCGGCGGGCATGCCCGCGGCGGCAAGTCCCGGCGTAGCGCCTGA
PROTEIN sequence
Length: 290
MASTARTLWKGAISFGLVHIPVALYTATQENELDFDWLDKRSMDPVGYKRVNKRTGREIARENIVKGIAYEDGRYVVLSDDEIRAAYPESTQTIEIETFVAADAIPFVYLERPYYLAPLGKGAKVYALLREALFKTGRIGVARVVIQTKQHLAALIPAGPGLVLNLLRWGDEIRSWENLDLPEEGSHAEGISAREMKMAVQLIEDMAGDWDPRQFHDEFKEKILQLVQARIQADETQAVTPIESMEEARPTADIVDLTELLKRSLDKNKGGGGASGGGHARGGKSRRSA*