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scnpilot_p_inoc_scaffold_340_8

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(5384..7804)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase clustered with Ku protein, LigD {ECO:0000313|EMBL:CCU62204.1}; EC=6.5.1.1 {ECO:0000313|EMBL:CCU62204.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 841.0
  • Bit_score: 983
  • Evalue 1.30e-283
ATP-dependent DNA ligase clustered with Ku protein, LigD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI13_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 841.0
  • Bit_score: 983
  • Evalue 9.40e-284
  • rbh
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 818.0
  • Bit_score: 958
  • Evalue 1.20e-276

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2421
ATGGCCAGGAACGATGCCCTGCGGACCTACCGCGCCAAGCGCGACTTCGCCCACACGCCCGAACCCGCCCACGGCGGCAAGCCCGGCGCGCACGCCCTGTCCTTCGTCGTCCAGCGCCATGCGGCGCGGCGCCTGCACTACGACTTCCGGCTGGAGCTGGACGGCACGCTCAAGAGCTGGGCCGTGCCCAAGGGGCCGAGTCTGGACCCGGGCGTCAAGCGCATGGCGGTCCAGGTCGAGGACCACCCGCTGTCCTACGGCAGCTTCGAAGGCCGCATCCCCGAGGGCCACTATGGCGCCGGCGAGGTCGCCATCTGGGATGCCGGAACCTGGATCCCACTGGAGGATCCGCGCAAGGGCTATCGCGCGGGCAAGCTCAAGTTCGAACTGCGCGGCGCCAAGCTGCACGGCCAGTGGGCGCTGGTGCGGATGCGCAAAGCCGAGAAGCAGCCGGCCTGGCTGTTGATCAAGGAAAAGGACGACTACGCGGTCACCGGTCCCGAGGCCGAGGCCGAGGAAGCGTCCGCCCCGGCGCCGGCCTACGCCAGGCTGCCGGCCTCGCTCGAGCCGCAGTTGGCGACGCTGGTGAACGCGCCGCCGCCCGATCCCGAACACTGGCAATACGAACTGAAGTTCGACGGCTACCGGATCCTGGCCCGCATCGAAGGCAGCCAGGTGCGCCTGTACACGCGCACCGGCAAGGACTGGACGCGCAAGCTGGAGGAACTGCGCGCCGCCATCGCGGCCATGAACCTGGCCGATGCCTGGCTGGACGGCGAGATCATCGTGCCCGACGAACACGGCATCCCCGACTTCCAGGCCCTGCAGAACGCCTTCGAGACGGGCTCCGCCCAAGATGCCGTCTACTACCTGTTCGACCTGCCCTTCTACGCCGGCCGCGACCTGCGCCGCCTGCCGCTGGCCGAGCGTCGCACGACGCTGCGCAGCCTGCTGGACGGCGCCGACCCGGCGCGCGTGCGCTTCAGCGACGCGTTCGAGGCCGCGCCGCGCGACCTGGTCGCCTCGGCCTGCCGGCTGGGCTTCGAAGGCGTGATCGGCAAGCGCAAGGACGGCGGCTACCGCTCGGGCCGCTCCACAGACTGGATCAAGCTCAAGTGCCAGAACCGCCAGGAGTTCGTCATCGGCGGCTATACCGATCCGCAAGGCACGCGCTCGGGATTGGGTTCGCTGCTGCTGGGCGTGCACGACGATGATGGGCGTCTGCGCTACGCGGGCAACGTCGGTTCGGGATTCGACCAGCGCACCCTGTTGTCGCTGAAGAAGCGCCTGGATGAACTGGCCGCGCCGCACTCCCCGTTCGAGCGCAACACGAAGGGGCTGGGCAAGGCCCACTGGGTGCGTCCCGAACTGCTGGCCGAAGTCTCGTTCGCCGAATGGACCGGCGGCGGCCACATCCGCCAGGGCGTCTTCCGCGGGCTGCGCACGGACAAGCCCGCCGGCGCCGTCACCCGCGAACAGGCAACCGCGCCGCCCAAGGAGTCCGACACCATGCAAAGCAACGGCCTGCCCGCCTCTTTCCGCGTGACGCATCCGGGACGGGTGATCGACAAGCAGAGCGGCATCACCAAGCTGCAACTGGTCCAGTGCTACGCGGCCATGGCGCCTTTGCTGCTGCCACACCTGAAGAACCGGCCCGTGGCCCTGGTGCGGGCACCCGACGGCGTGGGCGGCGAACGCTTCTTCCAGAAGCACGCCGACCGCGCCGCGCTGCCCGGCATGGTCCGGCTGCCGCGCGAGATCGACCCGGGCCATCCGCCGCTGATGAAGATCGACGACCTGCAGGGCCTCCTGTCCGCGGCGCAGATGAACACCATCGAGCTGCACACCTGGAACGGCACGGACGATGCGATCGGCACGCCCGACCGCATGACCTTCGACCTGGACCCCGGCGAAGGCGTGGACTGGCCGCGCATCCGCGAAGGCACCCAGCTCGTGCACGCCTTCCTGCGCGAACTGGGCCTGCCCGCCTTCCTGAAGACCAGCGGCGGCAAAGGCATGCACATCATCGTACCGCTGCGGCCGCAATACGACTGGGACACGGTCAAGGCCTTCTCGCGCGCCATCGTCCAGCACCTGGCACAGACCCTGCCCAGCCATTTCGTGGCCAAGAGCGGGCCGAAGAACCGGGTCGGAAGGATATTCATCGACTATCTGCGCAACGGCTTCGGCGCCACCACGGTGTCGGCCTGGTCGGTACGCGCCCGGCCGGGGCTGGCCGTATCGGTGCCGGTGGCCTGGGAGGAACTGGACGGCTTGTCGGGTTCAGCCCACTGGACGCTGCACACGCTGGGCGATCGGCTTGCCACGGGCAACACGCCCTGGGCCGACTACGAGGGGTCGCGGATCGCGCTGACAGACGCGATGCGGCGCCTGGACTTCGATCCGGCCAAACTTGCGTAA
PROTEIN sequence
Length: 807
MARNDALRTYRAKRDFAHTPEPAHGGKPGAHALSFVVQRHAARRLHYDFRLELDGTLKSWAVPKGPSLDPGVKRMAVQVEDHPLSYGSFEGRIPEGHYGAGEVAIWDAGTWIPLEDPRKGYRAGKLKFELRGAKLHGQWALVRMRKAEKQPAWLLIKEKDDYAVTGPEAEAEEASAPAPAYARLPASLEPQLATLVNAPPPDPEHWQYELKFDGYRILARIEGSQVRLYTRTGKDWTRKLEELRAAIAAMNLADAWLDGEIIVPDEHGIPDFQALQNAFETGSAQDAVYYLFDLPFYAGRDLRRLPLAERRTTLRSLLDGADPARVRFSDAFEAAPRDLVASACRLGFEGVIGKRKDGGYRSGRSTDWIKLKCQNRQEFVIGGYTDPQGTRSGLGSLLLGVHDDDGRLRYAGNVGSGFDQRTLLSLKKRLDELAAPHSPFERNTKGLGKAHWVRPELLAEVSFAEWTGGGHIRQGVFRGLRTDKPAGAVTREQATAPPKESDTMQSNGLPASFRVTHPGRVIDKQSGITKLQLVQCYAAMAPLLLPHLKNRPVALVRAPDGVGGERFFQKHADRAALPGMVRLPREIDPGHPPLMKIDDLQGLLSAAQMNTIELHTWNGTDDAIGTPDRMTFDLDPGEGVDWPRIREGTQLVHAFLRELGLPAFLKTSGGKGMHIIVPLRPQYDWDTVKAFSRAIVQHLAQTLPSHFVAKSGPKNRVGRIFIDYLRNGFGATTVSAWSVRARPGLAVSVPVAWEELDGLSGSAHWTLHTLGDRLATGNTPWADYEGSRIALTDAMRRLDFDPAKLA*