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scnpilot_p_inoc_scaffold_407_244

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(252546..253484)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 246.0
  • Bit_score: 323
  • Evalue 2.90e-85
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 246.0
  • Bit_score: 320
  • Evalue 4.90e-85
tRNA pseudouridine synthase B n=38 Tax=Bordetella RepID=TRUB_BORBR similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 246.0
  • Bit_score: 320
  • Evalue 1.70e-84
  • rbh

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGCTTCCCGACGCGGGCGTGCGCTGGATGGTGTGTTGTTGCTGGACAAACCCGAGGGCTTGTCCAGCAATCATGCCTTGCAGCGCGCTCGGCGCATCCTGGATGCGCGCAAGGCGGGGCATACCGGGACGCTGGATCCGTTTGCCACCGGCCTGATGGTGCTGTGCTTCGGCGAGGCGACCAAGTTCTCCGGCGGGATGTTCGACGCCGACAAGAGCTATGCCGCCACGCTGGCGCTGGGCGAGGAAACCGACAGCGGTGACCGTACGGGCGTGCCGGTCGGCTTTCCCGGCCAGGACCCCGAGGCGGCCGTGGACGAGGCGCGGATGCTCGACGTGTTGTCACGCTTCGTCGGCAGGATTTCGCAGGTGCCGCCCATGTATTCCGCGCTCAAGCGCGACGGCAAGCCCTTGTACGAATATGCGCGCGCGGGCGTCGAGCTGGAGCGCGAGCCCAGGCAGGTCACGATCCACGGGTTGCGGCTGTTGTCGCTGTCCGGACGGTCGGCAACGATAGACGTCGCGTGCAGCAAGGGCACCTACGTCCGCACGCTGGCGCAGGACGTCGGCCGGGCGCTGGGGTGCGGCGCGCACCTGACGGCGCTGCGCCGCACGCGCACGGCGGGGTTCGACCTTGCCCAGGCCTGGACGCTGGAGCGGCTGGAAGCCCAGGCCGATCCGGCCGGCGCGCTGCTGCCGATGGAGTCGCTGCTGGCCGACCTGCCGGTCGTGCGGCTGGACGCCGCGGCGGCCCAGCGCTTCATGCAGGGACGCAAGGAAAGAATGGCCGCCGGCGATGCAACCGGCACGGCGGCCGCCGAGACAGATGCAGGCAAGGTCCGGGTTGCCGGACCGGACGGTGGATTCCTGGGAACGGCTCGCTGCGAGGACGGCTGGCTGCAGCCCGACAGATTGATTTCATTCAAGGAAACGACATGA
PROTEIN sequence
Length: 313
MASRRGRALDGVLLLDKPEGLSSNHALQRARRILDARKAGHTGTLDPFATGLMVLCFGEATKFSGGMFDADKSYAATLALGEETDSGDRTGVPVGFPGQDPEAAVDEARMLDVLSRFVGRISQVPPMYSALKRDGKPLYEYARAGVELEREPRQVTIHGLRLLSLSGRSATIDVACSKGTYVRTLAQDVGRALGCGAHLTALRRTRTAGFDLAQAWTLERLEAQADPAGALLPMESLLADLPVVRLDAAAAQRFMQGRKERMAAGDATGTAAAETDAGKVRVAGPDGGFLGTARCEDGWLQPDRLISFKETT*