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scnpilot_p_inoc_scaffold_407

Search features with annotation key words

Displaying items 1-30 of 282 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_407_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1446
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8HFL8_PSEAI
Cation transporter {ECO:0000313|EMBL:AKE69116.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
cusA; cation efflux system protein CusA
scnpilot_p_inoc_scaffold_407_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2031..3002)
DNA (972bp) protein (324aa)
hypothetical protein, partial n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037CA825 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETU96929.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
transposase IS4 family protein
scnpilot_p_inoc_scaffold_407_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3394..5328)
DNA (1935bp) protein (645aa)
Phage-related integrase n=13 Tax=Pseudomonas aeruginosa RepID=E2ZUR8_PSEAI rbh
phage-related integrase
Integrase {ECO:0000313|EMBL:AKE69114.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
scnpilot_p_inoc_scaffold_407_4
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5763..8354)
DNA (2592bp) protein (864aa)
protein disaggregation chaperone n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D96D01 rbh
clpB; ATP-dependent protease, ATPase subunit
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis
scnpilot_p_inoc_scaffold_407_5
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8474..9841)
DNA (1368bp) protein (456aa)
DNA repair protein radA n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7TAP8_ALCXX rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter in
DNA repair protein RadA
scnpilot_p_inoc_scaffold_407_6
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..10947)
DNA (1104bp) protein (368aa)
dadX; catabolic alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000255|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000255|HAMAP-Rule:MF_01201};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
Alanine racemase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=ALR_BORPD rbh
scnpilot_p_inoc_scaffold_407_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11090..11959
DNA (870bp) protein (290aa)
hpnC; squalene synthase HpnC (EC:2.4.1.21)
Squalene synthase HpnC {ECO:0000313|EMBL:ADP17504.1}; EC=2.4.1.21 {ECO:0000313|EMBL:ADP17504.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; A
Squalene synthase HpnC n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HV67_ACHXA rbh
scnpilot_p_inoc_scaffold_407_8
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11949..12812
DNA (864bp) protein (288aa)
Phytoene synthase (EC:2.5.1.32)
Putative phytoene synthase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F431_9BURK rbh
Putative phytoene synthase {ECO:0000313|EMBL:EHK66926.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter ar
scnpilot_p_inoc_scaffold_407_9
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12791..14179
DNA (1389bp) protein (463aa)
Phytoene desaturase, pro-zeta-carotene producing (EC:1.-.-.-)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035D7FD3 rbh
Flavin containing amine oxidoreductase family protein {ECO:0000313|EMBL:EJO30301.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter
scnpilot_p_inoc_scaffold_407_10
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14193..14651)
DNA (459bp) protein (153aa)
Molybdenum cofactor biosynthesis protein E n=1 Tax=Azoarcus sp. KH32C RepID=H0PTI2_9RHOO
moaE; molybdenum cofactor biosynthesis protein E
Molybdenum cofactor biosynthesis protein E {ECO:0000313|EMBL:BAL24147.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcu
scnpilot_p_inoc_scaffold_407_11
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14653..14910)
DNA (258bp) protein (86aa)
Molybdenum cofactor biosynthesis protein D n=2 Tax=Ralstonia RepID=D8NU78_RALSL
moaD; molybdenum cofactor biosynthesis protein D
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" sourc
scnpilot_p_inoc_scaffold_407_12
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14914..16140)
DNA (1227bp) protein (409aa)
Molybdopterin biosynthesis protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CUI8_9BURK
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:EIJ47281.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herb
molybdopterin biosynthesis protein, molybdenum incorporation step
scnpilot_p_inoc_scaffold_407_13
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16196..17608)
DNA (1413bp) protein (471aa)
Threonine synthase {ECO:0000313|EMBL:EHK65147.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EHK65147.1};; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achrom
Threonine synthase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F982_9BURK rbh
Threonine synthase
scnpilot_p_inoc_scaffold_407_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17617..18924)
DNA (1308bp) protein (436aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Homoserine dehydrogenase n=37 Tax=Bordetella RepID=F4LIA2_BORPC rbh
scnpilot_p_inoc_scaffold_407_15
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19247..19630
DNA (384bp) protein (128aa)
Hypothetical 12.7 kDa protein in helA 5'region n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQS4_BORPD
hypothetical protein
Hypothetical 12.7 kDa protein in helA 5'region {ECO:0000313|EMBL:CAP43091.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
scnpilot_p_inoc_scaffold_407_16
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19681..20145
DNA (465bp) protein (155aa)
Alkyl hydroperoxide reductase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JFJ1_ALCFA
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:EJC62504.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes fa
redoxin family protein
scnpilot_p_inoc_scaffold_407_17
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20254..21996
DNA (1743bp) protein (581aa)
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5NPW1_9BORD rbh
PhoH family protein {ECO:0000313|EMBL:KCB36882.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-0
AAA domain protein
scnpilot_p_inoc_scaffold_407_18
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21998..23395
DNA (1398bp) protein (466aa)
CoA-transferase III family protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0APN2_BURTH rbh
CAIB/BAIF family CoA transferase {ECO:0000313|EMBL:KDP88883.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavid
coA-transferase III family protein
scnpilot_p_inoc_scaffold_407_19
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23392..24093)
DNA (702bp) protein (234aa)
branched-chain amino acid ABC transporter ATP-binding protein (EC:3.6.3.28); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
Putative amino-acid ATP-binding ABC transporter protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGP4_METPP
amino-acid ATP-binding ABC transporter protein
scnpilot_p_inoc_scaffold_407_20
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24090..24872)
DNA (783bp) protein (261aa)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:KDB07298.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KDB07298.1};; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
ABC transporter related protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WHN3_9BURK
ABC transporter related protein
scnpilot_p_inoc_scaffold_407_21
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24865..26127)
DNA (1263bp) protein (421aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G382_9BURK
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EOA03372.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.
putative ABC-type branched-chain amino acid transporter, membrane component
scnpilot_p_inoc_scaffold_407_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26124..27083)
DNA (960bp) protein (320aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AE9_POLSJ
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABE44493.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pol
scnpilot_p_inoc_scaffold_407_23
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27220..28731
DNA (1512bp) protein (504aa)
UPF0061 protein AXXA_20157 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T507_ALCXX rbh
UPF0061 protein AXXA_20157 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
hypothetical protein
scnpilot_p_inoc_scaffold_407_24
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28740..29141
DNA (402bp) protein (134aa)
msrB; methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=8 Tax=Bordetella RepID=K0MLB3_BORPB
scnpilot_p_inoc_scaffold_407_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29236..29826
DNA (591bp) protein (197aa)
Probable intracellular septation protein A n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=YCIB_CUPTR
intracellular septation protein A; K06190 intracellular septation protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
ispZ; intracellular septation protein a
scnpilot_p_inoc_scaffold_407_26
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29823..30107
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000364179F
BolA-like protein
BolA-like protein {ECO:0000313|EMBL:CAE38636.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (st
scnpilot_p_inoc_scaffold_407_27
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30161..30928
DNA (768bp) protein (256aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobactera
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Achromobacter piechaudii HLE RepID=J4YP08_9BURK rbh
PPIC-type PPIASE domain protein
scnpilot_p_inoc_scaffold_407_28
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31351..32397
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003040650
Porin {ECO:0000313|EMBL:EJO31996.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
outer membrane porin protein
scnpilot_p_inoc_scaffold_407_29
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32806..33861
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003040650
outer membrane porin protein
Outer membrane porin protein {ECO:0000313|EMBL:AEC20305.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas s
scnpilot_p_inoc_scaffold_407_30
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33955..37983)
DNA (4029bp) protein (1343aa)
Phosphoribosylformylglycinamidine synthase n=3 Tax=Bordetella bronchiseptica RepID=K0MJJ2_BORBM rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
purL; phosphoribosylformylglycinamidine synthase
Displaying items 1-30 of 282 in total

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