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scnpilot_p_inoc_scaffold_584_2

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 176..1129

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW47_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 294.0
  • Bit_score: 163
  • Evalue 4.70e-37
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 294.0
  • Bit_score: 163
  • Evalue 1.30e-37
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACS16745.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 32.3
  • Coverage: 294.0
  • Bit_score: 163
  • Evalue 6.60e-37

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGGCAGGCACGCTTATCCGTATGACGTAGACGCCGAGCCGACGCTCTACAACGAGCGCAGCTTTCTGACACGGGAAGCCTTGGAGCGGTGGGCAGGATTTCCGCTGGGATACAACTTCGCGGATGGACCTCTGCACAACCCGGCCCGCTATCGCGCGCATCCGAGCCTGGCCTGCATCGCATCCGGCCATGCCGAGGCCACCATGTTGTGCAACGGCAAGCCGTTTCAGCTGAAAACGGATCCAGGATCGATCGGGCTCTTTGCTCCGCATACGGAGATCGAACGATGCTGGTGGCATTCCCTGAACGCCGAACGCGTGGTCATAGAGCTGGACATGTCCGAATTGAATCCGGCCATGAAGCTGGATGACGAAATTCTCGATGTCCCGTTGGACCTGGACCTGCAGTTCTACGATCCGTCATTGCTGCAGACCATGCTCGCGATTGCCCGGGAAGTCCAGCATGGGTGTCCGAATGGACCGTTGTATGCGCAATCTCTGTGCCTGGGCCTGGCGTTGTATCTCAGGCGGAGATTCTCTTCCCGCCCGCTGACCCGGACTTTCGACAGGGGCCGTCTTACTTCGCCGCAACTGCGGGCAATCGACGAATACATCAAGGAGTCGATCGGGACCGACATGAACGTCGATGCCCTGGCCGGGTTGATCGGTTTGAGCAAACCGCACTTCATGAAGCTCTTCCGCATGACGACCGGCACGTCGCCATATCAATACGTGCTGCGGGCTCGTGTCGAGGCCGCGGCTGTTCTCGTGAAGCAGGGGCATCCGCTGGCGAGCGTGGCCCGGAAGGCCGGATTTTCCAGCCAGAGCCATTTCTCGGCGGTGTTCGCCAAGTACATGGGGATGCCCCCCAAGCGATATCTGTCCAGTGTGCAGGGCAAGTCAAGGCAGGAGATCAATGATGAGGAGGTTCATGGAGAAACGAAACCTGTGTGA
PROTEIN sequence
Length: 318
MGRHAYPYDVDAEPTLYNERSFLTREALERWAGFPLGYNFADGPLHNPARYRAHPSLACIASGHAEATMLCNGKPFQLKTDPGSIGLFAPHTEIERCWWHSLNAERVVIELDMSELNPAMKLDDEILDVPLDLDLQFYDPSLLQTMLAIAREVQHGCPNGPLYAQSLCLGLALYLRRRFSSRPLTRTFDRGRLTSPQLRAIDEYIKESIGTDMNVDALAGLIGLSKPHFMKLFRMTTGTSPYQYVLRARVEAAAVLVKQGHPLASVARKAGFSSQSHFSAVFAKYMGMPPKRYLSSVQGKSRQEINDEEVHGETKPV*