name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_p_inoc_scaffold_584_1
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..147
|
branched-chain amino acid ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035DB599
ABC transporter related
ABC transporter related {ECO:0000313|EMBL:ABE47013.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
|
|
scnpilot_p_inoc_scaffold_584_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
176..1129
|
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW47_VARPS
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACS16745.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
|
|
scnpilot_p_inoc_scaffold_584_3
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1206..2882
|
Tannase and feruloyl esterase (EC:3.1.1.73)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037013A2
rbh
Tannase Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
scnpilot_p_inoc_scaffold_584_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2937..3488)
|
LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003801470
LuxR family transcriptional regulator {ECO:0000313|EMBL:GAD24957.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
LuxR family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_584_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3606..4310
|
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:AEF89595.1}; EC=2.8.3.5 {ECO:0000313|EMBL:AEF89595.1};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
3-oxoacid CoA-transferase, A subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6B1W5_DELSC
|
|
scnpilot_p_inoc_scaffold_584_6
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4312..4956
|
3-oxoacid CoA-transferase subunit B; K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
3-oxoacid CoA-transferase, B subunit n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVM0_COMTE
succinyl-CoA:3-ketoacid-CoA transferase
|
|
scnpilot_p_inoc_scaffold_584_7
Acinetobacter gerneri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5144..6475
|
Uncharacterized protein n=2 Tax=Acinetobacter gerneri RepID=N8ZHH9_9GAMM
rbh
Uncharacterized protein {ECO:0000313|EMBL:ENV33209.1}; TaxID=1120926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter gern
Rieske (2Fe-2S) iron-sulfur domain-containing protein
|
|
scnpilot_p_inoc_scaffold_584_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6468..7820
|
fahA; fumarylacetoacetase (EC:3.7.1.2)
Fumarylacetoacetase {ECO:0000313|EMBL:CAP44365.1}; EC=3.7.1.2 {ECO:0000313|EMBL:CAP44365.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Borde
Fumarylacetoacetase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I718_BORPD
|
|
scnpilot_p_inoc_scaffold_584_9
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
7844..8821
|
GroES-like protein {ECO:0000313|EMBL:EEN86397.1}; EC=1.6.5.5 {ECO:0000313|EMBL:EEN86397.1};; TaxID=596309 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rho
quinone oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF2F
quinone oxidoreductase
|
|
scnpilot_p_inoc_scaffold_584_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8869..9870
|
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFT0_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_584_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9920..10957
|
Outer membrane porin protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P929_9BURK
Outer membrane porin protein {ECO:0000313|EMBL:ELX07982.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthin
gram-negative type outer membrane porin protein
|
|
scnpilot_p_inoc_scaffold_584_12
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10954..11652)
|
Crp/FNR family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SA73_9BURK
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:EHP40622.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C
Crp family transcriptional regulator
|
|
scnpilot_p_inoc_scaffold_584_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11813..12232
|
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E8243
Uncharacterized protein {ECO:0000313|EMBL:CDX60177.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
scnpilot_p_inoc_scaffold_584_14
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12354..13316
|
Uncharacterized protein n=2 Tax=Bordetella holmesii RepID=M5NLH9_9BORD
tripartite tricarboxylate transporter receptor family protein
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KAK83253.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
|
|
scnpilot_p_inoc_scaffold_584_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13418..14302
|
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJL1_XANP2
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ABS68204.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanth
|
|
scnpilot_p_inoc_scaffold_584_16
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria
|
Not on your lists |
14332..14865
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A9AD2
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_584_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14898..15113
|
Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JAU1_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDP53187.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
|
|
scnpilot_p_inoc_scaffold_584_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15273..16436
|
hypothetical protein n=1 Tax=Spongiibacter tropicus RepID=UPI0003B308CA
FOG: GGDEF domain {ECO:0000313|EMBL:CDP51917.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
diguanylate cyclase
|
|
scnpilot_p_inoc_scaffold_584_19
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16546..18651
|
Diguanylate cyclase/phosphodiesterase n=1 Tax=Burkholderia sp. SJ98 RepID=K8R7N7_9BURK
rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KAK45700.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
diguanylate cyclase/phosphodiesterase
|
|
scnpilot_p_inoc_scaffold_584_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18607..19434)
|
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator id=5083630 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
DNA-binding transcriptional activator MhpR; K05818 IclR family transcriptional regulator, mhp operon transcriptional activator Tax=GWE1_Burkholderiales_65_30_curated
DNA-binding transcriptional activator MhpR
|
|
scnpilot_p_inoc_scaffold_584_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19550..20536
|
Putative uncharacterized protein id=1275412 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
rbh
putative Bug-like extracytoplasmic solute binding receptor, TTT family Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
|
|
scnpilot_p_inoc_scaffold_584_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20555..22312
|
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase id=1275411 bin=GWE1_Burkholderiales_65_30 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
monooxygenase, FAD-binding:FAD dependent oxidoreductase Tax=GWE1_Burkholderiales_65_30_curated
2,4-dichlorophenol 6-monooxygenase
|
|
scnpilot_p_inoc_scaffold_584_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22312..23307
|
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase (EC:1.13.11.16); K05713 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] id=5083633 bin=GWF1_Burkholderiales_GWF1_66_17 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
rbh
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase (EC:1.13.11.16); K05713 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] Tax=GWE1_Burkholderiales_65_30_curated
mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase
|
|
scnpilot_p_inoc_scaffold_584_24
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23310..24179
|
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase {ECO:0000256|HAMAP-Rule:MF_01654}; EC=3.7.1.14 {ECO:0000256|HAMAP-Rule:MF_01654};; 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic aci
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase n=3 Tax=Azotobacter vinelandii RepID=C1DRI5_AZOVD
rbh
mphC; 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase
|
|
scnpilot_p_inoc_scaffold_584_25
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24201..24881)
|
Isochorismatase family protein 9 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HEN5_ACHXA
rbh
isochorismatase
rbh
Nicotinamidase {ECO:0000313|EMBL:KGD86804.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
|
|
scnpilot_p_inoc_scaffold_584_26
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
comp(25018..26784)
|
TAP domain protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UA72_DEIML
TAP domain-containing protein
TAP domain protein {ECO:0000313|EMBL:ADV67961.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strai
|
|
scnpilot_p_inoc_scaffold_584_27
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26911..27165)
|
Transglycosylase-associated protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MBR6_9BURK
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:BAO89248.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
|
|
scnpilot_p_inoc_scaffold_584_28
unknown
|
Not on your lists |
comp(27265..27549)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_584_29
unknown
|
Not on your lists |
comp(27659..27859)
|
This feature has no annotations |
|
scnpilot_p_inoc_scaffold_584_30
unknown
|
Not on your lists |
28023..28382
|
This feature has no annotations |