ggKbase home page

scnpilot_p_inoc_scaffold_569_6

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(3346..3930)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000365E112 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 190.0
  • Bit_score: 263
  • Evalue 2.00e-67
TetR family transcriptional regulator {ECO:0000313|EMBL:KGH28552.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas te similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 194.0
  • Bit_score: 300
  • Evalue 2.10e-78
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 193.0
  • Bit_score: 245
  • Evalue 9.50e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGAACCATGATCTCTCGCCAAGGGCCGCCGAGATCGCCATGCGCGCGCGTTCGCTGTTGGCTGCCGGCGGCTACAACGGCTTCAGCTATGCCGACATTTCGGAGTCGGTGCAGATCAGCAAGGCCAGTATTCACCACCACTTCCCCAGCAAGGCTGAATTGGTGCGAACAGTCCTTGTGCTGTACCGCGAGGAAGCACGTGTGGGTATCGCGGCGTTGGAGCAGCAGATTCCCGATCCGTTGGCGCAGTTGGAAGCCTATACCGGGTATTGGGCGCGGTGTATTCGCGATGGCACGTCGTCGTTCTGTATTTGCGCCATGCTTGCCGCTGAATTACCCGCCATCCCGCGTGAAGTGGCGGATGAGGTCCGCGGGCATTTCCAGGATCTGGGGGCGTGGCTTGCATCCGTGTTGGCCAAGGGGGCCGCACAAGGTCTCTTTTTTCTACGAACGAGCCCGGAGGAAGAGGCCATGACCTTCATGGCGACGGTACACGGGGCAATGCTGTCCGCCCGCGCCTATGGTGACCCGGGGGTTTTCGAAACAGTCGTTCAGCCGCTCATGCGTCGATTGACATCCCGGTGA
PROTEIN sequence
Length: 195
MNHDLSPRAAEIAMRARSLLAAGGYNGFSYADISESVQISKASIHHHFPSKAELVRTVLVLYREEARVGIAALEQQIPDPLAQLEAYTGYWARCIRDGTSSFCICAMLAAELPAIPREVADEVRGHFQDLGAWLASVLAKGAAQGLFFLRTSPEEEAMTFMATVHGAMLSARAYGDPGVFETVVQPLMRRLTSR*