ggKbase home page

scnpilot_p_inoc_scaffold_569

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_569_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1060)
DNA (1059bp) protein (353aa)
UPI0003CDFED3 related cluster n=1 Tax=unknown RepID=UPI0003CDFED3 rbh
Chemotaxis protein {ECO:0000313|EMBL:ESY68935.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC
putative transporter
scnpilot_p_inoc_scaffold_569_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1057..1551)
DNA (495bp) protein (165aa)
Membrane protein 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HET7_ACHXA
hypothetical protein
Membrane protein 7 {ECO:0000313|EMBL:ADP17664.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxida
scnpilot_p_inoc_scaffold_569_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1633..2070
DNA (438bp) protein (146aa)
MerR family regulatory family protein 5 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXE1_ACHXA
MerR family transcriptional regulator {ECO:0000313|EMBL:KGY26165.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcali
MerR family transcriptional regulator
scnpilot_p_inoc_scaffold_569_4
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2067..2657)
DNA (591bp) protein (197aa)
Metal-dependent phosphohydrolase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T0Y1_ALCXX rbh
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EGP46060.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
hydrolase
scnpilot_p_inoc_scaffold_569_5
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2749..3267)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MMG2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:GAO01438.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
membrane protein
scnpilot_p_inoc_scaffold_569_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..3930)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000365E112
TetR family transcriptional regulator {ECO:0000313|EMBL:KGH28552.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas te
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_569_7
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4034..5662)
DNA (1629bp) protein (543aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Ralstonia pickettii (strain 12J) RepID=GUAA_RALPJ rbh
scnpilot_p_inoc_scaffold_569_8
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5666..7126)
DNA (1461bp) protein (487aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000363B564 rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
scnpilot_p_inoc_scaffold_569_9
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7249..7587)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L133_BORA1
hypothetical protein
UPF0125 protein AXXA_22755 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
scnpilot_p_inoc_scaffold_569_10
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7580..8011)
DNA (432bp) protein (144aa)
Polyketide cyclase/dehydrase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XC58_9BURK
Cyclase {ECO:0000313|EMBL:KGD98369.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein
scnpilot_p_inoc_scaffold_569_11
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8069..8527
DNA (459bp) protein (153aa)
SsrA-binding protein n=1 Tax=Bordetella avium (strain 197N) RepID=SSRP_BORA1
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (str
scnpilot_p_inoc_scaffold_569_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8653..9582)
DNA (930bp) protein (310aa)
Membrane protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E5U3H8_ALCXX rbh
Putative stomatin/prohibitin-family membrane protease subunit YbbK
Putative stomatin/prohibitin-family membrane protease subunit YbbK {ECO:0000313|EMBL:AHC46975.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae;
scnpilot_p_inoc_scaffold_569_13
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9635..10063)
DNA (429bp) protein (143aa)
Nodulation efficiency protein D n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XC53_9BURK
NfeD-like family protein 1 {ECO:0000313|EMBL:KGD98373.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter s
NfeD-like family protein 1
scnpilot_p_inoc_scaffold_569_14
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10209..12137
DNA (1929bp) protein (643aa)
Beta-lactamase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW46_PUSST rbh
Beta-lactamase {ECO:0000313|EMBL:AEC20060.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-
beta-lactamase
scnpilot_p_inoc_scaffold_569_15
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12243..12686
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003620DC3
Uncharacterized protein {ECO:0000313|EMBL:KGT95114.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi
hypothetical protein
scnpilot_p_inoc_scaffold_569_16
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12692..13591
DNA (900bp) protein (300aa)
Alpha/beta hydrolase fold n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS5_GLUDA rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KGT95113.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typographi.;"
alpha/beta hydrolase fold protein
scnpilot_p_inoc_scaffold_569_17
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13683..16046)
DNA (2364bp) protein (788aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854, ECO:0000313|EMBL:CAP42860.1}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854, ECO:0000313|E
Phosphoenolpyruvate synthase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9INQ5_BORPD rbh
scnpilot_p_inoc_scaffold_569_18
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16280..17128
DNA (849bp) protein (283aa)
Putative phosphoenolpyruvate synthase regulatory protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XYI8_ALCXX
PEP synthetase regulatory protein
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Sho
scnpilot_p_inoc_scaffold_569_19
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17122..18039)
DNA (918bp) protein (306aa)
Putative transcriptional regulators, LysR family n=1 Tax=Ralstonia solanacearum RepID=D8MYL0_RALSL
LysR family transcriptional regulator {ECO:0000313|EMBL:KJJ95423.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae
putative transcriptional regulators, LysR family
scnpilot_p_inoc_scaffold_569_20
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18348..19298
DNA (951bp) protein (317aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T355_BORBO rbh
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CCJ48625.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapert
scnpilot_p_inoc_scaffold_569_21
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19295..20293
DNA (999bp) protein (333aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QLI1_BORBO rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KCV65656.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;"
hypothetical protein
scnpilot_p_inoc_scaffold_569_22
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20348..21127
DNA (780bp) protein (260aa)
Creatininase family amidohydrolase {ECO:0000313|EMBL:KCV65667.1}; EC=3.5.2.- {ECO:0000313|EMBL:KCV65667.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
Putative creatinine amidohydrolase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QKF3_BORBO rbh
creatinine amidohydrolase
scnpilot_p_inoc_scaffold_569_23
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21138..21920
DNA (783bp) protein (261aa)
Putative aldolase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QEL6_BORBO rbh
aldolase
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:KCV65652.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sourc
scnpilot_p_inoc_scaffold_569_24
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21954..22742
DNA (789bp) protein (263aa)
Putative decarboxylase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6Y7_9BURK rbh
Putative decarboxylase {ECO:0000313|EMBL:EHK65901.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arseni
decarboxylase
scnpilot_p_inoc_scaffold_569_25
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22739..23989
DNA (1251bp) protein (417aa)
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:KCV65670.1}; EC=3.5.-.- {ECO:0000313|EMBL:KCV65670.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
Putative amino acid hydrolase n=3 Tax=Bordetella bronchiseptica RepID=K0MR55_BORBM rbh
amino acid hydrolase rbh
scnpilot_p_inoc_scaffold_569_26
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24011..25003
DNA (993bp) protein (331aa)
Phosphoglycerate dehydrogenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S175_9BURK rbh
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KJK16186.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacteri
phosphoglycerate dehydrogenase
scnpilot_p_inoc_scaffold_569_27
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25035..25448
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q0T0_ACIAP
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADX47597.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
scnpilot_p_inoc_scaffold_569_28
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25453..26247)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00038173BC rbh
RNA methyltransferase
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:KCV66384.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
scnpilot_p_inoc_scaffold_569_29
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26278..27054)
DNA (777bp) protein (259aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9INR5_BORPD
scnpilot_p_inoc_scaffold_569_30
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27047..28201)
DNA (1155bp) protein (385aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1003200 species="B
Lipid-A-disaccharide synthase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T6F2_ALCXX rbh
lpxB; lipid-A-disaccharide synthase
Displaying items 1-30 of 58 in total

View Taxonomy