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scnpilot_p_inoc_scaffold_1083_18

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 15527..16087

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C5691 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 165.0
  • Bit_score: 151
  • Evalue 1.10e-33
Transcriptional regulator {ECO:0000313|EMBL:EJL81866.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillu similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 161.0
  • Bit_score: 150
  • Evalue 2.60e-33
MarR family transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 163.0
  • Bit_score: 149
  • Evalue 6.80e-34

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGACTCGTACCCCGAAATCCGGCCCCGCCGCCGAGAAAACCGGCGCCGATCGACCGGCCGATGACTCGCCCTCCCTGATCGACGACCTGAACGAGCATCCCGGCCACCTCTTCCGCCGCGCGCAGCAGATCTCCACCTCGGTCTTCTACGCGACGCTCGGGGAACACATCACGCCCATACAGTTCGCCCTCCTGAACGCCATCCAGCACCACCCCGGCGTCGACCAAGTCACACTGGCCAGCCTGGTCGGCCTGGACACCTCGACCACCGCGGCCACCGCCACCCGGCTGGAGGAAAAGGGCCTGATCGAGCGGCGCCTGGAAGTCGTCCTGCGCCGGCAGCGCAAGCTGTACCTGACGGGCCAGGGGGTCCGGACCATGGAAGGCATGACCCAGGGCCTGACCGACATGCGCAAGCAATTGCTTTCCCGGCTGAGCCCCTGGGAGCAGGAAACCCTGATGCGCCTGCTGCGCAGGTTCGTCGAGGTGAACAACGAGTTCAGCCGGGCGCCGCTGGGGGAAGTCAGCCGGCTCCCCAAGGGCAAGCGCAACTCCGCCTGA
PROTEIN sequence
Length: 187
MTRTPKSGPAAEKTGADRPADDSPSLIDDLNEHPGHLFRRAQQISTSVFYATLGEHITPIQFALLNAIQHHPGVDQVTLASLVGLDTSTTAATATRLEEKGLIERRLEVVLRRQRKLYLTGQGVRTMEGMTQGLTDMRKQLLSRLSPWEQETLMRLLRRFVEVNNEFSRAPLGEVSRLPKGKRNSA*