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scnpilot_p_inoc_scaffold_1083

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1083_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62..982
DNA (921bp) protein (307aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUE6_CUPNN
LysR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1083_2
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1072..1674
DNA (603bp) protein (201aa)
NADPH-dependent FMN reductase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WF64_ACTMD
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ACU34196.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain
scnpilot_p_inoc_scaffold_1083_3
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1704..2495
DNA (792bp) protein (264aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Rhizobium sp. CF080 RepID=J2JR38_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB98427.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
2-hydroxymuconic semialdehyde hydrolase
scnpilot_p_inoc_scaffold_1083_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2492..3628
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037C113F rbh
Luciferase-like, subgroup
Luciferase-like, subgroup {ECO:0000313|EMBL:CDN50871.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" sou
scnpilot_p_inoc_scaffold_1083_5
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3655..4641
DNA (987bp) protein (329aa)
Extra-cytoplasmic solute receptor family protein 61 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MH34_9BURK
Extra-cytoplasmic solute receptor family protein 61 {ECO:0000313|EMBL:EIK88524.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;
hypothetical protein
scnpilot_p_inoc_scaffold_1083_6
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4676..5107)
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z3L4_DESAF
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGJ50386.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" sou
scnpilot_p_inoc_scaffold_1083_7
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5139..6029)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V6L6_HALED rbh
Epimerase {ECO:0000313|EMBL:KHK53835.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1083_8
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6141..7034
DNA (894bp) protein (298aa)
LysR family transcriptional regulator (EC:4.2.1.1)
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBV41344.1}; EC=4.2.1.1 {ECO:0000313|EMBL:CBV41344.1};; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
Transcriptional regulator, LysR family n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V6L5_HALED rbh
scnpilot_p_inoc_scaffold_1083_9
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7015..8073)
DNA (1059bp) protein (353aa)
Vanillate monooxygenase n=1 Tax=Burkholderia sp. YI23 RepID=G8MFR3_9BURK rbh
vanillate monooxygenase
Vanillate monooxygenase {ECO:0000313|EMBL:AET92430.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
scnpilot_p_inoc_scaffold_1083_10
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8087..9046)
DNA (960bp) protein (320aa)
Putative secreted protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IB39_BORPD
bug92; hypothetical protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESJ24535.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="
scnpilot_p_inoc_scaffold_1083_11
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9148..10086
DNA (939bp) protein (313aa)
LysR family transcriptional regulator n=1 Tax=Ralstonia sp. PBA RepID=I9BR43_9RALS
LysR family transcriptional regulator {ECO:0000313|EMBL:EIZ02241.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralston
nahR2; LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1083_12
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10083..11033)
DNA (951bp) protein (317aa)
Putative HTH-type transcriptional regulator, LysR family n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NHZ4_RALSL rbh
putative HTH-type transcriptional regulator, LysR family
Putative HTH-type transcriptional regulator, LysR family {ECO:0000313|EMBL:CBJ40518.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia
scnpilot_p_inoc_scaffold_1083_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..12109
DNA (978bp) protein (326aa)
Putative Bug-like extra cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8X0_VARPD rbh
putative Bug-like extra cytoplasmic solute receptor, TTT family
Putative Bug-like extra cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU49382.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
scnpilot_p_inoc_scaffold_1083_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12169..12912
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IEE4_XANP2
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS66387.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanth
scnpilot_p_inoc_scaffold_1083_15
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12922..13767
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6P9_CAUSK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ69666.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (s
scnpilot_p_inoc_scaffold_1083_16
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13772..14434)
DNA (663bp) protein (221aa)
GntR family transcriptional regulator n=2 Tax=Bordetella holmesii RepID=M5NN09_9BORD
Hydrolase {ECO:0000313|EMBL:KDB50395.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
alpha/beta hydrolase family protein
scnpilot_p_inoc_scaffold_1083_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14473..15411)
DNA (939bp) protein (313aa)
Catechol 1,2-dioxygenase n=2 Tax=Delftia acidovorans RepID=S2WF50_DELAC
intradiol ring-cleavage dioxygenase
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:EPD38383.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
scnpilot_p_inoc_scaffold_1083_18
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15527..16087
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C5691
Transcriptional regulator {ECO:0000313|EMBL:EJL81866.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillu
MarR family transcription regulator protein
scnpilot_p_inoc_scaffold_1083_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16100..17092)
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Delftia acidovorans RepID=A9BU50_DELAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD38384.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
scnpilot_p_inoc_scaffold_1083_20
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17118..17915)
DNA (798bp) protein (266aa)
2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003620501
2-dehydropantoate 2-reductase
scnpilot_p_inoc_scaffold_1083_21
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17991..18803)
DNA (813bp) protein (271aa)
aldolase n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI000312C9CB
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:EJN27729.1}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
aldolase II superfamily protein
scnpilot_p_inoc_scaffold_1083_22
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19005..20078
DNA (1074bp) protein (358aa)
Vanillate monooxygenase (EC:1.14.13.82)
Vanillate monooxygenase n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WPI0_DELAC rbh
Vanillate monooxygenase {ECO:0000313|EMBL:EZP58814.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
scnpilot_p_inoc_scaffold_1083_23
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20089..21138
DNA (1050bp) protein (350aa)
Rieske (2fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EIK92693.1}; EC=1.14.13.82 {ECO:0000313|EMBL:EIK92693.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
Vanillate O-demethylase oxygenase subunit (EC:1.14.13.82)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00035EB917 rbh
scnpilot_p_inoc_scaffold_1083_24
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21167..22366
DNA (1200bp) protein (400aa)
alcohol dehydrogenase; K00148 glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
aldehyde dismutase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237687E
alcohol dehydrogenase
scnpilot_p_inoc_scaffold_1083_25
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22377..24011
DNA (1635bp) protein (545aa)
Magnesium chelatase, subunit ChlI family protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJX2_ACHXA rbh
ATP-dependent protease {ECO:0000313|EMBL:KGY24850.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxyd
chelatase
scnpilot_p_inoc_scaffold_1083_26
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24048..25772)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000380B451 rbh
Diguanylate cyclase {ECO:0000313|EMBL:KDP74197.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensif
diguanylate cyclase
scnpilot_p_inoc_scaffold_1083_27
Aspergillus niger, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

25958..26455
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000312A95D
Uncharacterized protein {ECO:0000313|EMBL:EHA25614.1}; TaxID=380704 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Asperg
DinB family protein
scnpilot_p_inoc_scaffold_1083_28
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26587..27273
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYP7_9BURK
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AJP59969.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandora
scnpilot_p_inoc_scaffold_1083_29
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27388..28299
DNA (912bp) protein (304aa)
5-dehydro-4-deoxyglucarate dehydratase (EC:4.2.1.41)
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694, ECO:0000313|EMBL:CAP63339.1};; 5-keto-4-deoxy-glucarate dehydratase {EC
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHU0_CUPTR rbh
scnpilot_p_inoc_scaffold_1083_30
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28391..28534)
DNA (144bp) protein (48aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=4 Tax=cellular organisms RepID=A9BN42_DELAS
Displaying 30 items

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