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scnpilot_p_inoc_scaffold_1766_3

Organism: SCNpilot_P_inoc_Burkholderiales_62_9

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(2882..3154)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer TrbD transmembrane protein (Protein belongs to CMGI-2) n=10 Tax=Proteobacteria RepID=Q1LNQ0_RALME similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 9.60e-44
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 2.70e-44
Putative conjugal transfer TrbD transmembrane protein {ECO:0000313|EMBL:ACL72978.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalka similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 90.0
  • Bit_score: 183
  • Evalue 1.30e-43

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Taxonomy

Thioalkalivibrio sulfidiphilus → Thioalkalivibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAGCGGCCCGGACACCTTCGCGGCCGGGTTCGAGGTGCCGCTGCATCGCTCGCTCACCGAGCCGATTCTGCTGGGCGGCGCACCGCGCACCGTGGCAATCGCCAACGGCACGCTGGCCGCCGCCGTGGGGCTGGGCCTGCAACTGTGGATTCCCGGCGCCGTGCTCTGGATCGTCGGCCATGCGCTGGCAGTCTGGGGCGCGCGCGTCGATCCGCAGTTCATGGCCGTGTTCGCGCGGCACATCAAGCACCGCCCGCTGTTGGACGTGTGA
PROTEIN sequence
Length: 91
MSGPDTFAAGFEVPLHRSLTEPILLGGAPRTVAIANGTLAAAVGLGLQLWIPGAVLWIVGHALAVWGARVDPQFMAVFARHIKHRPLLDV*