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scnpilot_p_inoc_scaffold_1766

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1766_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..410)
DNA (408bp) protein (136aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WYQ7_COMTE
conjugal transfer protein TrbJ
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EED68018.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamona
scnpilot_p_inoc_scaffold_1766_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(407..2872)
DNA (2466bp) protein (822aa)
Putative mating pair formation protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84EN1_9BURK rbh
conjugal transfer protein TrbE
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AIJ47389.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo
scnpilot_p_inoc_scaffold_1766_3
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2882..3154)
DNA (273bp) protein (91aa)
Conjugal transfer TrbD transmembrane protein (Protein belongs to CMGI-2) n=10 Tax=Proteobacteria RepID=Q1LNQ0_RALME
conjugal transfer protein
Putative conjugal transfer TrbD transmembrane protein {ECO:0000313|EMBL:ACL72978.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalka
scnpilot_p_inoc_scaffold_1766_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3151..3528)
DNA (378bp) protein (126aa)
Conjugal transfer protein TrbC n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTS2_DELAS
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ABM43051.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_p_inoc_scaffold_1766_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3525..4568)
DNA (1044bp) protein (348aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTS3_DELAS rbh
P-type conjugative transfer ATPase TrbB
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ABX35337.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia a
scnpilot_p_inoc_scaffold_1766_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4565..5029)
DNA (465bp) protein (155aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTS4_DELAS
CopG/DNA-binding domain-containing protein {ECO:0000313|EMBL:GAO21826.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
CopG/DNA-binding domain-containing protein
scnpilot_p_inoc_scaffold_1766_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5026..7041)
DNA (2016bp) protein (672aa)
TRAG family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ5_ACIET rbh
TRAG family protein {ECO:0000313|EMBL:ACM34933.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
conjugal transfer coupling protein trag
scnpilot_p_inoc_scaffold_1766_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7258..7485)
DNA (228bp) protein (76aa)
UPI0003AA0F2D related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003AA0F2D
Uncharacterized protein {ECO:0000313|EMBL:GAD24976.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_1766_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7511..8425)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ7_ACIET rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO21041.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1766_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8481..9077)
DNA (597bp) protein (199aa)
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=2 Tax=Comamonadaceae RepID=A1W5E3_ACISJ
scnpilot_p_inoc_scaffold_1766_11
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9156..9560)
DNA (405bp) protein (135aa)
signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=2 Tax=Comamonadaceae RepID=A1W5E3_ACISJ
scnpilot_p_inoc_scaffold_1766_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9557..11956)
DNA (2400bp) protein (800aa)
Heavy metal translocating P-type ATPase n=2 Tax=Comamonadaceae RepID=A1W5E2_ACISJ rbh
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABM41467.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
scnpilot_p_inoc_scaffold_1766_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12043..12477
DNA (435bp) protein (145aa)
Transcriptional regulator, MerR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5E1_ACISJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABM41466.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_1766_14
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12611..14545
DNA (1935bp) protein (645aa)
Iron permease FTR1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W5E0_ACISJ rbh
iron permease FTR1 rbh
Iron permease FTR1 {ECO:0000313|EMBL:ABM41465.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
scnpilot_p_inoc_scaffold_1766_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14590..16572)
DNA (1983bp) protein (661aa)
type VI secretion protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E763D rbh
Relaxase type IV secretory pathway VirD2 {ECO:0000313|EMBL:GAD22499.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
hypothetical protein
Displaying 15 items

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