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scnpilot_p_inoc_scaffold_1960_11

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(5632..6360)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036362E2 similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 191.0
  • Bit_score: 263
  • Evalue 2.60e-67
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 201.0
  • Bit_score: 145
  • Evalue 1.70e-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavame similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 201.0
  • Bit_score: 145
  • Evalue 8.30e-32

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGCCGTCCCTCACCGCAACCGGAGCGAAAAGCGAGGCTGGCCGAAGCCCGCCGATGCGCTATCGTCTGATCGAGGGCGGTAGGGTGGAGCCGGCTGACCGAGAGGCCGGGACGAAAGGCGATAATTCACCCGTGGGGGATCGAAGCGACAGCGCAGCGGATGCCGCGATCCGCGCCGATGACAGGCTGATGCGGGCGGTCGCGGCCGGCGACGACGAAGCCTTCGGGCGCGTCATCACCGCCGAATCGCCGCGCCTGACGCGCTTCGTCGCCGCCGTCCTCTGCGATCTCGGCGAGGCCGAGGAGGTCGTGCAGGAGGCGCTCATCCGCCTCTGGCGCAATGCCGATGGCTGGGAGCCGCGCGCCCGCATCGGAACCTGGCTGCACCAGGTCGCTTATCGCCTGTCGATCGACCGCCTGCGACGCCGGCGCCCGCATGTCGATATCGACGATCTCGACGACGTGCTCGAGGACGACACGCCGTCGCCCGAGTGCCAGCTGTCGCGGATCGAGGATGTGCGCCTCGTCCACGAGGCGCTCGACCGCATGCCCGACCGCCAGCGCGCGGTGATCGTGCTGGCGCATTTCCAGGAGCTCGGCCAGGCGGAAGCCTCGGCCATCATGGGCATGAGCGAACATGCCTACGAATCCCTGCTCGCACGAGCGAGGCGGCGCCTGCGCGGCCTTCTGGCGGGACAAAGGGACGAGGACGGGGAGGATTGGACCTGA
PROTEIN sequence
Length: 243
MPSLTATGAKSEAGRSPPMRYRLIEGGRVEPADREAGTKGDNSPVGDRSDSAADAAIRADDRLMRAVAAGDDEAFGRVITAESPRLTRFVAAVLCDLGEAEEVVQEALIRLWRNADGWEPRARIGTWLHQVAYRLSIDRLRRRRPHVDIDDLDDVLEDDTPSPECQLSRIEDVRLVHEALDRMPDRQRAVIVLAHFQELGQAEASAIMGMSEHAYESLLARARRRLRGLLAGQRDEDGEDWT*