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scnpilot_p_inoc_scaffold_1960_14

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(10983..11879)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E6459 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 293.0
  • Bit_score: 235
  • Evalue 7.00e-59
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 282.0
  • Bit_score: 230
  • Evalue 6.40e-58
Transcriptional regulator with cupin sensor, AraC family {ECO:0000313|EMBL:EHS50753.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrob similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 290.0
  • Bit_score: 230
  • Evalue 2.40e-57

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCAGCAGGAATTTCTCGTCGATCCCGACCACATGACGCCGGAACGGGGCTCCTTCAACGTGGGCTCCGTAGCGGCCGTCCGACTCATGCGCTCGGCCCATGTCCACAGCCATGTCGAGATCAACCTCATCGTCGCCGGCCAGATGACCTATCTGTTCAACGGCCGCACGGTGACGCTGAAGCGCGGCGACCTCGCAATGTTCTGGGCCGCGATTCCGCACCGCGTGATCGCGATCGACGAGGGCACGAGCTTCATCTGCAGCGACGTGCCGATCGACATGGTGCTGGCGATGCCGGGCTGCGAGGCACTGAAGACGGCGCTCTTGCAGGGCGGGCTGCTCGTCGCGAACCGCGTGCGCCCCTTCGAGCAGGACCAGTTCGCCGACTGGCATGAGCTGCTGCTCCACCGCCGCGCGACCATGCTGCCGGTGGTGCGCGACGAGCTCGCGGCGCGGCTCCGCCGCATCGAGATCGACGGCTGGCGCGACCTTGCCTCAGACGAGGAGGAGCGCCGCGCCCGCGAGGCCGATCCCGACGGCGGCGACGCGCATCGCGACAAGGTGCATCGCATGGCCCGCTACATCGCCGAGCATGCCACCGAGGCGATCGCGGTCGCCGATATCGCCGCCTCGGTCGGGCTGCATCCCAACTATGCGATGACGCTGTTCCGCCGCACGCTCGGCATGACGATCAATGAATATGTGACGCGCCAGCGGCTGATGCTCGCCCATGGCCGTCTCCTCGCCAGCGAGGACGAGATCGCCGAGATCGCCTTCGAGGCCGGCTTCGGCTCGCTCAGCCGCTTCTATGAAGCGTTCCGCGAGCGCTATGGCTGCACGCCGCGCGACATGCGCCGCAGCTTCCGCGAGACCCGCGCCGCCAGCATTGCCGGCTGA
PROTEIN sequence
Length: 299
MQQEFLVDPDHMTPERGSFNVGSVAAVRLMRSAHVHSHVEINLIVAGQMTYLFNGRTVTLKRGDLAMFWAAIPHRVIAIDEGTSFICSDVPIDMVLAMPGCEALKTALLQGGLLVANRVRPFEQDQFADWHELLLHRRATMLPVVRDELAARLRRIEIDGWRDLASDEEERRAREADPDGGDAHRDKVHRMARYIAEHATEAIAVADIAASVGLHPNYAMTLFRRTLGMTINEYVTRQRLMLAHGRLLASEDEIAEIAFEAGFGSLSRFYEAFRERYGCTPRDMRRSFRETRAASIAG*