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scnpilot_p_inoc_scaffold_4774_5

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(3944..7447)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1397530 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 999.99
  • Bit_score: 1571
  • Evalue 0.0
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363EA78 similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 999.99
  • Bit_score: 1974
  • Evalue 0.0
  • rbh
Mfd, transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 999.99
  • Bit_score: 1565
  • Evalue 0.0
  • rbh

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Taxonomy

Labrenzia sp. C1B10 → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3504
ATGATTCGCTTCGATTCAGTTCTGCGCAGACGCTCGACCGTGCTGTCGGGTGTTCCCGACGGCCTGGACGGGCGCGTCGTCGCCGATCTCGCAACTCTGTCCGCCAAGGACGACCGGTCGTACCTGCTGGTCGTCGCGCGCGACGGGCAGCGCATGGCCGATCTCGAACAGGCGATCGCCTTCTTCGCGCCGGCCCAGGAGGTGCTGTCCTTCCCGGCCTGGGATTGCATGCCTTATGACCGCGTTTCGCCGAACTCGGCGGTCGTCGCGCGGCGGATGGCGGCGCTCTCGGCACTCGCCAACCGCAAGACCGAGGCCGGCAAGTGCCTCGTCGTGCTGACGACGGTCAACGCCGTCGTGCAGCGCGTGCCGCGCCGCGCCGATGTGGTGCGCCAGAGCCTGACCTTCTCTCCGGGCAGCCGCCTGCCGATGGAGCAGCTCATCGGCTGGCTGGAGGACAACGGCTTCCTGCGCACAGCGACCGTCCGCGAGGCCGGCGAATATGCCGTGCGCGGCGGCATCGTCGATCTCTTCGCCGCCGGCCTCGGCGAGCCGGTGCGGGTCGATTATTTCGGCGATACGGTCGATTCGATCCGCTCCTTCGATGCCGAAACGCAGCGCACCATCCAGCAGAAGAAGCGGCTCGATCTGGTGCCGGTCAGCGAGCTGGTGCTGTCGCCGCAGTCGATCGCCCGGTTCCGCGAGGCCTATGTGCGCCTCTTCGGTGCCTCCGACCGCGAGGATCTGCTCTATCAGCAGGTGAGCGAGGGACGGCGCTATACGGGCGTCGAGCACTGGCTGCCGCTCTTCGCCGAAGGGCTCGACACGCTGTTCGACTATCTGCCTGACACGGCTCTGGTGCTCGATCATCTTGTCGAGGAGGCGCTCGCGGAGCGGCTTGACGAGATCAAGGACCATTACGACGCGCGCCGCAGTGCCATGGGCCAGAACCAGGGCGGCGTGCCCTACAAACCGATCGCGCCAAACGCGCTCTATGTGGACAGCGCCGAGTGGAAGCGGCGCGAGGGCGAGCAGCCGCTCATCCGCATGACGCCGTTCGCGGAGCCGGACGACACGATGGTCGTCGATCTCGGCGGCCGGCACGGGCGGACCTTCGCCGCGGAGCGTCTCGCCGGTGACGTCAATGTCTTCGACGCCGTGATCAACCATGTCACGAGCCTGCGCGAAAAGAAGCGGGTGGTGATCGCGAGCTGGAGCGAGGGCGCGCGCGATCGCCTGACGCAGGTGCTCGCCGATCACGGCCTCAAGCGCGCAGAGGTGATCGAGAGCTGGCCTGCCGCCGCGGCGCTGCCGAAGGGCGTCGTCGGGCTCGGCGTGCTCGGGCTCGAGACGGGCTTCGATTCGCCCGATCTCGTGATGATCGGCGAGCAGGACATTCTCGGCGATCGCCTCGTCCGGCCGCGCAAGCGCTCGAAGAAGGGGTCCGACTTCCTCTCCGAGGTGACGGCGCTCGCCGAGGGCGACCTCGTCGTGCATGTCGATCACGGCATCGGCCGCTTCACCGGCCTCAAGACGATCACGGCGGCAGGCGCACCGCGCGACTGCCTCGAGATCGTCTATGCCGGCGGCGACCGGCTCTATCTGCCGGTCGAGAATATCGAGCTCCTGTCGCGCTACGGCTCCGAGGATACGGACGCGACGCTCGACAAGCTCGGCGGCGTCGCCTGGCAATCGCGCAAGGCGAAGCTCAAGAAGCGCATTCGCGACATGGCGGCCCAGCTCATCAAGGTGGCCGCCGCCCGCGCCATGCGCCATGCCGAGGTGATCACGCCGCCGGAGGGGCTTTATGACGAGTTCGCGGCGCGATTCCCCTATGAGGAGACGGAAGACCAGCTTTCGGCCATCGAGGCGGTGATGACGGATCTCGCCGCCGGCACGCCGATGGACCGGCTCGTCTGCGGCGATGTCGGCTTCGGCAAGACTGAAGTGGCGCTTCGCGCCGCCTTCCTCGCCGTCATGAGTGGCCGGCAGGTGGCGGTCGTGGTGCCGACGACGCTCCTGTCGCGCCAGCATTTCAAGACCTTCTCGACCCGCTTCGCCGGCTTCCCGGTGCGCGTCGAGCAGGCCTCGCGGCTGGTTTCGGCCAAGGACCTCGCCGAGACCAAGAAGGGGCTCAAGGAAGGGCAGGTCGACATCGTCGTCGGCACGCATGCCCTGCTCGGCAAGGGCATCGAGTTCCGCGATCTCGGCCTTCTCATCATCGACGAGGAGCAGCATTTCGGCGTCAAGCACAAGGAGCGGCTCAAGGAGCTGAAGGGCGACGTGCATGTGCTGACGCTCTCGGCGACGCCGATCCCGCGCACGCTGCAGCTGGCGCTCACCGGCGTGCGCGAGCTGTCGCTCATCACCACGCCGCCGGTCGACCGCATGGCGGTGCGCACCTTCATCTCGCCCTTCGACGCGCTCGCCGTGCGCGAGGCGCTTCTGCGCGAGCGCTATCGCGGCGGCCAGAGCTTCTATGTCTGCCCGCGGCTCGCCGATCTCGCCGACCGCAAGGAATTCCTCGAAAAGTTCGTGCCCGAGGTGAAGGTCGCGATCGCGCATGGCCAGATGCCGGCGACCGAGCTCGACGACATCATGAACGCCTTCTACGAGGGCGCCTATGACGTGCTGCTCTCGACGACGATCGTCGAATCCGGCCTCGACATCCCGACCGCCAACACGCTGATCGTGCATCGCGCCGACATGTTCGGCCTCGCGCAGCTCTATCAGCTGCGGGGCCGCGTCGGCCGCTCCAAGACGCGCGCCTATGCGCTTTTCACCGTGCCGGCCGAGAAGAAGCTCACCGCCATGGCCGATCGCCGGCTGAAGGTGCTGCAGTCGCTCGATACGCTCGGCGCGGGCTTCCAGCTCGCTAGCCACGATCTCGACATCCGCGGCGCCGGCAATCTCCTCGGCGAGGAGCAGTCCGGCCATATCAAGGAAGTCGGCTACGAGCTCTACCAGCAGATGCTGGAGGAGGCGGTCGCGCAGCTTCGCCAGGGCGGCGGCGAGGAGGTCGAGGAGGATGGCCGCTGGTCGCCGCAGATCACGGTCGGGACGCCGGTAATGCTGCCCGAGACCTATGTGCCGGACCTGCCGCTGCGCCTCAGCCTCTATCGCCGGCTCGGCGATCTCGAGGAGCCGGACCAGATCGACGCCTTCGGCGCCGAGCTGATCGACCGCTTCGGCCCGCTTCCGGACGAGGTCGAGCATCTCCTGAAGATCGTCTACATCAAGGCGCTCTGCCGCCGCGCGAATGTCGAGAAGGTCGATGCCGGCCCGAAGGGCATGGTCATCTCCTTCCGCAATTCGGTGTTCCCGAACCCGGCTGGCCTCATCCGCTATATCGGCGAGCAGGGCAGCCTCGCGAAGGTCCGCCCCGACCAGAAGATCGTGCTGATCCGCGACTGGGAAGACCCCGAGAAGCGGCTGAAGGGCACGGCGGTGGTGCTGACCCAGCTCGCGCGCATCGCGGTCGGCGACGGCAAGAAGGCGGCTTAA
PROTEIN sequence
Length: 1168
MIRFDSVLRRRSTVLSGVPDGLDGRVVADLATLSAKDDRSYLLVVARDGQRMADLEQAIAFFAPAQEVLSFPAWDCMPYDRVSPNSAVVARRMAALSALANRKTEAGKCLVVLTTVNAVVQRVPRRADVVRQSLTFSPGSRLPMEQLIGWLEDNGFLRTATVREAGEYAVRGGIVDLFAAGLGEPVRVDYFGDTVDSIRSFDAETQRTIQQKKRLDLVPVSELVLSPQSIARFREAYVRLFGASDREDLLYQQVSEGRRYTGVEHWLPLFAEGLDTLFDYLPDTALVLDHLVEEALAERLDEIKDHYDARRSAMGQNQGGVPYKPIAPNALYVDSAEWKRREGEQPLIRMTPFAEPDDTMVVDLGGRHGRTFAAERLAGDVNVFDAVINHVTSLREKKRVVIASWSEGARDRLTQVLADHGLKRAEVIESWPAAAALPKGVVGLGVLGLETGFDSPDLVMIGEQDILGDRLVRPRKRSKKGSDFLSEVTALAEGDLVVHVDHGIGRFTGLKTITAAGAPRDCLEIVYAGGDRLYLPVENIELLSRYGSEDTDATLDKLGGVAWQSRKAKLKKRIRDMAAQLIKVAAARAMRHAEVITPPEGLYDEFAARFPYEETEDQLSAIEAVMTDLAAGTPMDRLVCGDVGFGKTEVALRAAFLAVMSGRQVAVVVPTTLLSRQHFKTFSTRFAGFPVRVEQASRLVSAKDLAETKKGLKEGQVDIVVGTHALLGKGIEFRDLGLLIIDEEQHFGVKHKERLKELKGDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFISPFDALAVREALLRERYRGGQSFYVCPRLADLADRKEFLEKFVPEVKVAIAHGQMPATELDDIMNAFYEGAYDVLLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKTRAYALFTVPAEKKLTAMADRRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGYELYQQMLEEAVAQLRQGGGEEVEEDGRWSPQITVGTPVMLPETYVPDLPLRLSLYRRLGDLEEPDQIDAFGAELIDRFGPLPDEVEHLLKIVYIKALCRRANVEKVDAGPKGMVISFRNSVFPNPAGLIRYIGEQGSLAKVRPDQKIVLIRDWEDPEKRLKGTAVVLTQLARIAVGDGKKAA*