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scnpilot_p_inoc_scaffold_5490_2

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(3072..3962)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B5BC2 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 295.0
  • Bit_score: 382
  • Evalue 4.60e-103
  • rbh
RND transporter MFP subunit {ECO:0000313|EMBL:EZQ17459.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ba similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 306.0
  • Bit_score: 279
  • Evalue 7.70e-72
Efflux transporter RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 288.0
  • Bit_score: 270
  • Evalue 5.50e-70

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGCAGATCGACGACGCCGTCGAGCGCGCCAATCTCGGCTCCGCGCAGACCTCGGTCGCCGTCGCCCAGGAGGCGCTGACCCGCGCGCAGCAGCTGCTCGACCGCAAGGTCGGCACGGTCGCCGCGCTGCAGGACGCGCAGAACAATCTCGACAAGGCCAAGGGCACGCTGCAGCAGCTCGAGGCGAATATCGACCAGAAGGCCGTGAAGGCGCCGTTCGCCGGCACGATCGGCATCGCGAAGATCGATGTCGGCCAGTATGTCCAGCCCGCGACCGTCATCGCCACGCTGCAGAATCTCGACACGATGAAGGTCAATTTCACCGTGCCGGAGCAGCAGCTCGGCGCGCTCAAGATCGGCCAGAGCGTGCAGTTCGGCATGGAATCCGGCAACTTGCCCTACAAGGGCGCGATCACCGGCATCGATCCGAAGATCGACCCGGCCTCGCGCCTCGTCAGCGTCCAGGCGGAGGTGTCCAATTCCGACGGCGCCCTGCGCCCCGGCATGTTCATCCATGTCCGCATCGAGCTGCCGGTCGAGACCGACGTGATCGCGCTGCCGCAGACCGCCGTCACGATCAGCCTCTACGGCACCTATGTCTATGTGATCGAGAAGGCGCCGCCGCCGGCCGCCAAGCCCGCCGACGCGAATGCCGGAGCCGCCGCCGCGCAGCCCGCGCCGCCGCCGCCGGAATTCGTTGCCAAGCAGGTCTTCGTCCAGACCGGCCGCCGTTCGGGCGACACGATCGAGATCATCAAGGGCGTGACGCCCGGCGAGCTGATCGCGACGTCCGGCCGGAACAAGCTCTCGCCCGGCAGCCCCGTCGCCATCGACAAGGATGGTGAGCCGCCCGAGGGCGCCGTGCAGCCCGCTGGAGCGGTGCAGCCATGA
PROTEIN sequence
Length: 297
VQIDDAVERANLGSAQTSVAVAQEALTRAQQLLDRKVGTVAALQDAQNNLDKAKGTLQQLEANIDQKAVKAPFAGTIGIAKIDVGQYVQPATVIATLQNLDTMKVNFTVPEQQLGALKIGQSVQFGMESGNLPYKGAITGIDPKIDPASRLVSVQAEVSNSDGALRPGMFIHVRIELPVETDVIALPQTAVTISLYGTYVYVIEKAPPPAAKPADANAGAAAAQPAPPPPEFVAKQVFVQTGRRSGDTIEIIKGVTPGELIATSGRNKLSPGSPVAIDKDGEPPEGAVQPAGAVQP*