ggKbase home page

scnpilot_p_inoc_scaffold_6735_7

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(4516..4962)

Top 3 Functional Annotations

Value Algorithm Source
Redox-sensitive transcriptional activator SoxR n=1 Tax=Sphingomonas sp. S17 RepID=F3WUE5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 133.0
  • Bit_score: 207
  • Evalue 7.80e-51
SoxR protein {ECO:0000313|EMBL:GAN12614.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 139.0
  • Bit_score: 218
  • Evalue 8.10e-54
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 145.0
  • Bit_score: 202
  • Evalue 7.10e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGATCGCGGAGGAACTCACGATCGGCGAGGTGGCGCGGCGCGCCGGCGTGCCGGTCTCGACGCTGCATTTCTACGAGGCCAAGGGGCTGATCCGCAGCCGCCGCAGCGCCGGTAACCAGCGGCGCTACCCGCGCGCCATCCTGCGTCTGATCGCGATCATCCGCGTCGGTCAGAAGACCGGCATTCCGCTCGCCGAGATCCGTTCCCGGCTCGATCGCCTGCCCCGCGACCGGCCCGTCTCGTCGGACGACTGGGCGATTCTTTCGGGCGAGTGGCGCGCGGCGCTGGACGAGCGCATAACGCTCCTGACCCGCCTCCGCGACCAGCTCGACGGCTGCATCGGCTGCGGCTGCCTTTCGATGCGCGATTGTCCCTTGCGCAATCCAGGCGACAGCGCCGCCGCCGAGGGACCCGGCGCCCGCGCCTTCAGGACCGCCGGCGACTGA
PROTEIN sequence
Length: 149
MIAEELTIGEVARRAGVPVSTLHFYEAKGLIRSRRSAGNQRRYPRAILRLIAIIRVGQKTGIPLAEIRSRLDRLPRDRPVSSDDWAILSGEWRAALDERITLLTRLRDQLDGCIGCGCLSMRDCPLRNPGDSAAAEGPGARAFRTAGD*