ggKbase home page

scnpilot_p_inoc_scaffold_6864_2

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: 725..1054

Top 3 Functional Annotations

Value Algorithm Source
Anti-anti-sigma factor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFR6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 109.0
  • Bit_score: 105
  • Evalue 3.10e-20
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 109.0
  • Bit_score: 105
  • Evalue 4.30e-20
anti-anti-sigma regulatory factor SpoIIAA similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 109.0
  • Bit_score: 97
  • Evalue 2.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGAGATCGAGGAGGCGCGGCGCGGCACATCCCTCGTCGTCACGCCGACCGGCCGCCTCGACAGCGGTAGCGCGCCCGACTTCGAGGCACGACTCGGCGAGGATATCGACGGCGGCGCGCATGACGTCGTGATCGACCTCTCGCGGCTCGACTATATCAGCAGCAAGGGCCTCTCGGCGCTGCTCTCCGCCGGCAAGCGCATGAAGCGCGCCGAGGGGCGCATGGTCCTCGCCGCCGCAAGCGGGGCGGTGCGCCAGGTCATCGTGATCAGCGGCTTCGACCGCGTCTTCGAGCTCCACGACAGCGTCGACGCGGCGCTCGGCGGCTGA
PROTEIN sequence
Length: 110
MEIEEARRGTSLVVTPTGRLDSGSAPDFEARLGEDIDGGAHDVVIDLSRLDYISSKGLSALLSAGKRMKRAEGRMVLAAASGAVRQVIVISGFDRVFELHDSVDAALGG*