ggKbase home page

scnpilot_p_inoc_scaffold_6936_4

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(2855..6049)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 999.99
  • Bit_score: 1713
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Kaistia granuli RepID=UPI0003732519 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 999.99
  • Bit_score: 1951
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 999.99
  • Bit_score: 1713
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3195
GGCAAGCGCGTCGACTATTCCGGCCGTTCGGTCATCGTGGTCGGCCCGGAGATGAAGCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTCGAGCTGTTCAAGCCGTTCATCTATTCGCGCCTCGACGCCAAGGGCTTCTCCTCGACGGTGAAGCAGGCGAAGAAGCTCGTCGAGAAGGAGCGGCCGGAGGTCTGGGATATCCTGGACGAGGTCATCCGCGAGCATCCGATCCTGCTGAACCGCGCCCCGACGCTTCACCGCCTCGGCATCCAGGCTTTCGAGCCGGTGCTGATCGAGGGCAAGGCGATCCAGCTGCATCCGCTCGTCTGCTCGGCCTTCAATGCCGACTTCGACGGCGACCAGATGGCCGTGCACGTCCCGCTGTCGCTCGAGGCGCAGCTGGAAGCGCGCGTCCTGATGATGTCGACCAACAACATCCTGCATCCGGCGAACGGCCTGCCGATCATCGTGCCGTCGCAGGACATCGTCCTTGGCCTCTATTATCTGTCGATCATGGCGGAGAAGGAGCCGGGCGAGGGCATGATGTTCGGCTCGATCGCGGAGATCGAGCATGCGCTGGCCGCCAAGGCGATCACGCTGCACACCAAGATCCGCGGCCGCTATCGCAGCGTCGATGCGGACGGCAAGGTCACGTCGAAGATCTACGACACGACCCCCGGCCGCCTGCTGATCGGCGAACTGCTGCCGAAGCACCACAACCTGCCCTTCGACGTCGTCAACAAGCTGATGACGAAGAAGGAAATCTCGAACACGATCGACGCCGTCTACCGCCATTGCGGTCAGAAGGAGACGGTCATCTTCTGCGATCGCATCATGGCGCTCGGCTTCCGCGAGGCCTGCCGCGCGGGCATCTCGTTCGGCAAGGACGACATGGTGATCCCGGCCGCGAAGACGAAGCTGGTCGAGGAGACGCAGGCTCAGGTCAAGGACTACGAGCAGCAGTACAATGACGGCCTGATCACCTATGGCGAGAAGTACAACAAGGTCGTCGACGCCTGGGCCAAGTGCGGTGATCGCGTCGCCGAGGAGATGATGAAGGGCATCTCGGCCGTGCGCCGGGATGACGAAACGGGTCGTCAGAAGCCGATGAACTCGGTCTACATGATGAGCCACTCGGGTGCGCGTGGTTCGCCCACGCAGATGAAGCAGCTTGCCGGCATGCGCGGTCTGATGACCAAGCCGTCGGGCGAGATCATCGAGAACCCGATCATCTCGAACTTCAAGGAAGGCCTGACGGTTCTCGAGTACTTCAACTCGACCCACGGCGCCCGCAAGGGTCTCGCCGATACGGCTCTGAAGACGGCCAATTCCGGCTATCTGACGCGCCGCCTCGTCGACGTGGCGCAGGACTGCATCATCATCGAGAAGGATTGCGGCACCACCAACGGCCTGCGCATGCAGGCGGTGGTCGACAGCGGGCAGGTCGTCGCCTCGCTCGGCCTGCGCATCCTCGGCCGCACCGCGGCGGAGGACATCGTGGCCGCCGCGACCGGCGATGTGATCGTCCCGGCCGGCAAGCTGATCGAGGAGCGTGACGTCGAGCGCGTCGAGAAGGCCGGCGTCCAGGCGGTGAAGATCCGCTCGGTGCTGACCTGCGACACCAAGATCGGCGTCTGCGCGGCCTGCTACGGCCGTGACCTCGCCCGCGGCACCCCGGTCAACATGGGTGAAGCGGTCGGCGTCATCGCGGCGCAGTCGATCGGCGAGCCGGGCACGCAGCTCACCATGCGCACCTTCCACATCGGTGGTACGGCCCAGGTGGTGGACTCGTCCTTCATCGAGTCCTCCTTCGAGGGCACGGTGCAGATCCGCAACCGCAACGTCGTGCGGGACTCGGACGGCAAGCTCATCGCGCTCGGCCGCAATATGGCGATCGTGATCGTCGACAAGGACGGGACGGAGCGCGCGGTCAATCGCGTGACCTACGGCTCGCGCCTGCATGTCGACGAGGGCGATCAGGTCAAGCGCGGCCAGCGCCTCGCGGAGTGGGACCCCTATACCCGTCCCGTTCTCACCGAGGTCGAGGGCACGATCGGCTACGAGGATCTCGTGGAAGGCATCTCGGTCGCGGAAACGGCCGACGAGTCGACGGGCATCACCAAGCGCGTCGTCATCGACTGGCGCGCCAGCCCGCGCGGCAGCGACCTGAAGCCGGCGATCGTGATCAAGGGCAAGGACGGCAAGGTGCTGAAGCTCGCCCGTGGCGGCGAGGCACGCTACCTGCTCTCGGTGGAGACCATTCTCTCGGTCGATCCGGGCTCGAACGTCCATGCCGGCGACGTACTGGCCCGTATCCCCACCGAGGGTGCCAAGACCCGCGACATCACGGGCGGTCTGCCGCGCGTGGCGGAGCTGTTCGAGGCGCGCCGGCCGAAGGATCACGCGATCATCGCCGAGATGGACGGTACCGTCCGCTTCGGCCGCGACTACAAGAACAAGCGCCGCGTCATCATCGAGCCGGTCGAAGGCTCGGTCGATGCGGCGGGCATGCCGCTGCAGCCTGTTGAGTATCTCATCCCGAAGGGCAAGCCGTTCCATCTCCAGGAAGGCGACGCCGTCGAGAAGGGCGACTACATCATGGACGGCAATCCGGCGCCGCATGACATCCTGGCGATCAAGGGCGTGGAGGCTCTCGCGGCCTATCTCGTCAACGAGATCCAGGACGTCTACCGGCTCCAGGGCGTGCAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCAGAAGGTCGAGGTCGTGGACGGCGGCGAGACGGAGTTCTTCTCCGGCGAGCAGGTCGACCAGCTCGAGTTCGACCTGGTCAACGAGAAGGCCAAGAATGAGGGCAAGAAGCCGGCGATCGGCAATCCTGTCCTGCTCGGCATCACCAAGGCCAGCCTGCAGACGCGGTCGTTCTTCTCGGCGGCCTCGTTCCAGGAGACGACCCGCGTCCTCACGGAAGCGGCCGTCAACGGCAAGGTCGATCCGCTGGATGGCCTCAAGGAGAACATCATCGTCGGCCGCCTGATCCCGGCGGGTACCGGCGGCACGATGAACCGGATCCGCGAGATCGCGACCCGTCGCGACGAACTGATCCTCGAGGAGCGCCGCCGCGCCTCGGCCTCGCAGCCGAAGCCCGAGACCGGTGGCCTGCTCGGCAACCTGACCAGCGCCGCCGAGTAA
PROTEIN sequence
Length: 1065
GKRVDYSGRSVIVVGPEMKLHQCGLPKKMALELFKPFIYSRLDAKGFSSTVKQAKKLVEKERPEVWDILDEVIREHPILLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGLPIIVPSQDIVLGLYYLSIMAEKEPGEGMMFGSIAEIEHALAAKAITLHTKIRGRYRSVDADGKVTSKIYDTTPGRLLIGELLPKHHNLPFDVVNKLMTKKEISNTIDAVYRHCGQKETVIFCDRIMALGFREACRAGISFGKDDMVIPAAKTKLVEETQAQVKDYEQQYNDGLITYGEKYNKVVDAWAKCGDRVAEEMMKGISAVRRDDETGRQKPMNSVYMMSHSGARGSPTQMKQLAGMRGLMTKPSGEIIENPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDCIIIEKDCGTTNGLRMQAVVDSGQVVASLGLRILGRTAAEDIVAAATGDVIVPAGKLIEERDVERVEKAGVQAVKIRSVLTCDTKIGVCAACYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVVDSSFIESSFEGTVQIRNRNVVRDSDGKLIALGRNMAIVIVDKDGTERAVNRVTYGSRLHVDEGDQVKRGQRLAEWDPYTRPVLTEVEGTIGYEDLVEGISVAETADESTGITKRVVIDWRASPRGSDLKPAIVIKGKDGKVLKLARGGEARYLLSVETILSVDPGSNVHAGDVLARIPTEGAKTRDITGGLPRVAELFEARRPKDHAIIAEMDGTVRFGRDYKNKRRVIIEPVEGSVDAAGMPLQPVEYLIPKGKPFHLQEGDAVEKGDYIMDGNPAPHDILAIKGVEALAAYLVNEIQDVYRLQGVQINDKHIEVIVRQMLQKVEVVDGGETEFFSGEQVDQLEFDLVNEKAKNEGKKPAIGNPVLLGITKASLQTRSFFSAASFQETTRVLTEAAVNGKVDPLDGLKENIIVGRLIPAGTGGTMNRIREIATRRDELILEERRRASASQPKPETGGLLGNLTSAAE*