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scnpilot_p_inoc_scaffold_10897_1

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(3..461)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00037BECB6 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 151.0
  • Bit_score: 164
  • Evalue 1.00e-37
Multidrug efflux system {ECO:0000313|EMBL:CDX39652.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 156.0
  • Bit_score: 164
  • Evalue 1.40e-37
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 146.0
  • Bit_score: 163
  • Evalue 6.40e-38

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
GTGAGTGCCGAACCCGCCAGAGAGGCCGAGAAGCCCGCCCCGCAGCTCAGCGTCGTGCCCGAGGCGCCGCCGCCGAAGCGCCGCCGCAGCCTGCGCCTCGTCCTGATGCTGGTGGTGCCGCTCGCGATCGCTCTCGGCGGCGGCTATCTCTGGCTGACCGGCGGCCGCTTCGTCTCGACCGACAACGCCTATCTCGAACAGAACCGCGTCGCGATCACCGCCGACCAGTCCGGCCGCATCGTCGATGTCGCGGTGCGCGAGAACCAGGCGGTAAAGAAGGGCGATCTTCTCTTCAAGATCGATCCGCAGCCCTATCAGATCGCGCTCGACCAGGCCGATGCCGCCGTCGCGGCGGCGCGGCTGCAGGTCGAGCAGCTGCGTTCGTCCTGGCAGCAGGCCGTGGCCGAGCAGAAGTCGGCCGAGGAGACGCTCGACTACCAGCAGAAGGTCTTCGCCCGG
PROTEIN sequence
Length: 153
VSAEPAREAEKPAPQLSVVPEAPPPKRRRSLRLVLMLVVPLAIALGGGYLWLTGGRFVSTDNAYLEQNRVAITADQSGRIVDVAVRENQAVKKGDLLFKIDPQPYQIALDQADAAVAAARLQVEQLRSSWQQAVAEQKSAEETLDYQQKVFAR