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scnpilot_p_inoc_scaffold_9429_6

Organism: SCNpilot_P_inoc_Rhizobiales_67_4_fragment_2

partial RP 38 / 55 MC: 1 BSCG 35 / 51 MC: 1 ASCG 4 / 38
Location: comp(4749..4886)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB23_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 52.0
  • Bit_score: 61
  • Evalue 2.10e-07
Uncharacterized protein {ECO:0000313|EMBL:KKB84104.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.; similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 45.0
  • Bit_score: 67
  • Evalue 4.10e-09
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 52.0
  • Bit_score: 61
  • Evalue 5.90e-08

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 138
CGGCTGCGCGACGCCGAGATCGCATTGATGCGGGCGAGCCATGCCTATGGCGGCATCTTCGACGCGCTGGCCCGCCACATCGTCACCAGCATGGGCAATCTCGACACGGCGGAGCCGATCCGGGTGGCGGCGGAGTAG
PROTEIN sequence
Length: 46
RLRDAEIALMRASHAYGGIFDALARHIVTSMGNLDTAEPIRVAAE*