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scnpilot_p_inoc_scaffold_857

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_857_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..595)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000376232C
Transcriptional activator of acetoin/glycerol metabolism {ECO:0000313|EMBL:GAD22199.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
acoR; transcriptional regulator
scnpilot_p_inoc_scaffold_857_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

804..2330
DNA (1527bp) protein (509aa)
Aldehyde Dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW43_ALIDB
aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:GAO25412.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
scnpilot_p_inoc_scaffold_857_3
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2335..2796
DNA (462bp) protein (154aa)
pyridoxamine 5'-phosphate oxidase-like protein; K07006 id=12498072 bin=THIO_MID species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyridoxamine 5'-phosphate oxidase-like protein
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein {ECO:0000313|EMBL:AFJ84500.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Bur
scnpilot_p_inoc_scaffold_857_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2796..3359
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003777C9B
Uncharacterized protein {ECO:0000313|EMBL:GAD22202.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_857_5
unknown

Not on your lists

comp(3284..3445)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_857_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3538..4017
DNA (480bp) protein (160aa)
Chemotaxis sensory transducer n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW8_ALIDB
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAO25002.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" so
scnpilot_p_inoc_scaffold_857_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4057..5271
DNA (1215bp) protein (405aa)
Chemotaxis sensory transducer n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW8_ALIDB
methyl-accepting chemotaxis sensory transducer
Chemotaxis sensory transducer {ECO:0000313|EMBL:ADV01445.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
scnpilot_p_inoc_scaffold_857_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5272..5502)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPQ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46801.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_p_inoc_scaffold_857_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5588..6538)
DNA (951bp) protein (317aa)
tyrosine recombinase XerC n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000373A2D2
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
tyrosine recombinase xerc
scnpilot_p_inoc_scaffold_857_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6538..7227)
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01447.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_857_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7430..7810
DNA (381bp) protein (127aa)
DoxX n=2 Tax=Comamonas testosteroni RepID=D0J518_COMT2
DoxX
DoxX {ECO:0000313|EMBL:EHN67069.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
scnpilot_p_inoc_scaffold_857_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7847..9523
DNA (1677bp) protein (559aa)
Beta-lactamase domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T878_ACIDE
Beta-lactamase domain protein {ECO:0000313|EMBL:EER59325.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
beta-lactamase domain-containing protein
scnpilot_p_inoc_scaffold_857_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9516..10229
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037FADCD
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases {ECO:0000313|EMBL:GAD23854.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
RNA-binding S4 domain-containing protein
scnpilot_p_inoc_scaffold_857_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10326..11246
DNA (921bp) protein (307aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Al
Cysteine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRX5_ALIDB
cysteine synthase
scnpilot_p_inoc_scaffold_857_15
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11342..11647
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Staphylococcus xylosus RepID=UPI00034D4D9E
Monooxygenase {ECO:0000313|EMBL:KGF30458.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;"
hypothetical protein
scnpilot_p_inoc_scaffold_857_16
unknown

Not on your lists

comp(11678..11899)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_857_17
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12349..13719
DNA (1371bp) protein (457aa)
Amidase {ECO:0000313|EMBL:KEH08584.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KEH08584.1};; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source
Amidase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BST3_DELAS rbh
amidase
scnpilot_p_inoc_scaffold_857_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13700..14575)
DNA (876bp) protein (292aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
Protease HtpX homolog n=2 Tax=Alicycliphilus denitrificans RepID=E8TS11_ALIDB
peptidase M48 Ste24p
scnpilot_p_inoc_scaffold_857_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14639..15412)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUK0_9BURK
transmembrane protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
hypothetical protein
scnpilot_p_inoc_scaffold_857_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15390..16352)
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family n=2 Tax=Acidovorax RepID=B9MCR6_ACIET
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM40854.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_857_21
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16443..16997
DNA (555bp) protein (185aa)
C4-dicarboxylate ABC transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036593F0
TRAP dicarboxylate transporter subunit DctQ {ECO:0000313|EMBL:GAO20610.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
TRAP dicarboxylate transporter subunit DctQ
scnpilot_p_inoc_scaffold_857_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16994..18292
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter DctM subunit n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RX26_COMTE
TRAP dicarboxylate transporter subunit DctM Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
C4-dicarboxylate ABC transporter
scnpilot_p_inoc_scaffold_857_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18321..19358
DNA (1038bp) protein (346aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY59_ALIDB
trap dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter subunit DctP Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_857_24
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19431..20897)
DNA (1467bp) protein (489aa)
DNA methyltransferase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252CE
putative type I restriction enzymeP M protein
Putative type I restriction enzymeP M protein {ECO:0000313|EMBL:AIO41022.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkhol
scnpilot_p_inoc_scaffold_857_25
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20910..21572)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NBQ2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX88750.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR
scnpilot_p_inoc_scaffold_857_26
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21575..22969)
DNA (1395bp) protein (465aa)
ATPase-like protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NAZ3_9BURK rbh
ATPase-like protein rbh
ATPase-like protein {ECO:0000313|EMBL:AGX88751.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
scnpilot_p_inoc_scaffold_857_27

Not on your lists

comp(22980..23246)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD51560.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_857_28
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23239..24756)
DNA (1518bp) protein (506aa)
restriction endonuclease n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252CB
Type I restriction enzyme EcoKI specificity protein {ECO:0000313|EMBL:EXI75327.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus
restriction modification system DNA specificity domain-containing protein
scnpilot_p_inoc_scaffold_857_29
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24853..27633)
DNA (2781bp) protein (927aa)
type III restriction endonuclease subunit R n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026252CA
hsdR-4; type I restriction enzyme subunit R
Type I restriction enzyme subunit R {ECO:0000313|EMBL:AGX88753.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacte
scnpilot_p_inoc_scaffold_857_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27695..29515)
DNA (1821bp) protein (607aa)
metal ABC transporter permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003630871
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components {ECO:0000313|EMBL:GAD20325.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
ABC transporter-like protein
Displaying items 1-30 of 39 in total

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