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scnpilot_p_inoc_scaffold_864

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_864_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..755
DNA (753bp) protein (251aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4P2_ACISJ
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (stra
scnpilot_p_inoc_scaffold_864_2
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(807..1175)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AJX6_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP63803.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwane
scnpilot_p_inoc_scaffold_864_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1613..2074)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003711B12
Transcriptional regulator {ECO:0000313|EMBL:EJL73480.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_864_4
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2671..4068
DNA (1398bp) protein (466aa)
Chlorogenate esterase {ECO:0000313|EMBL:EKA66564.1}; EC=3.1.1.42 {ECO:0000313|EMBL:EKA66564.1};; TaxID=903913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Ac
Chlorogenate esterase n=1 Tax=Acinetobacter baumannii AA-014 RepID=L9N2H2_ACIBA rbh
esterase
scnpilot_p_inoc_scaffold_864_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4378..5007)
DNA (630bp) protein (210aa)
UPI00039F57B1 related cluster n=1 Tax=unknown RepID=UPI00039F57B1
Uncharacterized protein {ECO:0000313|EMBL:GAD20744.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
ABC transporter
scnpilot_p_inoc_scaffold_864_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5064..6845
DNA (1782bp) protein (594aa)
ABC transporter related protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4N8_ACISJ rbh
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABM41213.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
scnpilot_p_inoc_scaffold_864_7
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6901..7512)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031CD594
Prolyl 4-hydroxylase subunit alpha-like protein {ECO:0000313|EMBL:EHP40668.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" so
SM-20-related protein
scnpilot_p_inoc_scaffold_864_8
unknown

Not on your lists

7667..7978
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_864_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8005..9441
DNA (1437bp) protein (479aa)
beta-Casp domain-containing protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379254C
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:GAD24318.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
RNA-metabolising metallo-beta-lactamase
scnpilot_p_inoc_scaffold_864_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9586..11007
DNA (1422bp) protein (474aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:00
3-isopropylmalate dehydratase large subunit n=1 Tax=Acidovorax sp. (strain JS42) RepID=LEUC_ACISJ
scnpilot_p_inoc_scaffold_864_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11019..11144
DNA (126bp) protein (42aa)
Putative small secreted protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EPZ3_9BURK
Putative small secreted protein {ECO:0000313|EMBL:EJE54224.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
scnpilot_p_inoc_scaffold_864_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11162..11815
DNA (654bp) protein (218aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ95_9BURK
scnpilot_p_inoc_scaffold_864_13
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11896..12966
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=2 Tax=Acidovorax RepID=B9MDL2_ACIET
scnpilot_p_inoc_scaffold_864_14
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12977..15790
DNA (2814bp) protein (938aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037314AA
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KHD31735.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylom
ATP-dependent DNA helicase, RecQ family
scnpilot_p_inoc_scaffold_864_15
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15730..18174
DNA (2445bp) protein (815aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037314AA
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KHD31735.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylom
ATP-dependent DNA helicase, RecQ family
scnpilot_p_inoc_scaffold_864_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18429..19541
DNA (1113bp) protein (371aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYG7_ALIDB
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
scnpilot_p_inoc_scaffold_864_17
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19783..22428
DNA (2646bp) protein (882aa)
Putative transmembrane protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDL5_ACIET
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ACM34024.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_p_inoc_scaffold_864_18
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22511..23335
DNA (825bp) protein (275aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q0C9_ACIAP
tRNA pseudouridine synthase A
scnpilot_p_inoc_scaffold_864_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23332..24042
DNA (711bp) protein (237aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003744DDB
scnpilot_p_inoc_scaffold_864_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24039..25292
DNA (1254bp) protein (418aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Tryptophan synthase beta chain n=2 Tax=Alicycliphilus denitrificans RepID=E8TYH1_ALIDB
scnpilot_p_inoc_scaffold_864_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25289..26098
DNA (810bp) protein (270aa)
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=596154 species="B
Tryptophan synthase alpha chain n=2 Tax=Alicycliphilus denitrificans RepID=E8TYH2_ALIDB
scnpilot_p_inoc_scaffold_864_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26111..26983
DNA (873bp) protein (291aa)
acetyl-CoA carboxylase carboxyl transferase subunit beta n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003732941
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
scnpilot_p_inoc_scaffold_864_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27041..27583)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAU0_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43365.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_p_inoc_scaffold_864_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27613..28287
DNA (675bp) protein (225aa)
peptidase S16 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000362BC38
Peptidase S16 lon domain protein {ECO:0000313|EMBL:GAD24348.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
peptidase s16 lon domain-containing protein
scnpilot_p_inoc_scaffold_864_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28336..29883
DNA (1548bp) protein (516aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAU8_ACISJ
lysS; lysyl-tRNA synthetase
scnpilot_p_inoc_scaffold_864_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29885..30490
DNA (606bp) protein (202aa)
MscS Mechanosensitive ion channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TYI5_ALIDB
mscs mechanosensitive ion channel
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:AEB83690.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
scnpilot_p_inoc_scaffold_864_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30617..31729
DNA (1113bp) protein (371aa)
Extracellular ligand-binding receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TYI6_ALIDB
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:GAO24467.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
scnpilot_p_inoc_scaffold_864_28
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31808..32737
DNA (930bp) protein (310aa)
L-isoleucine ABC transporter membrane protein / L-valine ABC transporter membrane protein / L-leucine ABC transporter membrane protein n=2 Tax=Acidovorax RepID=A1WAV2_ACISJ
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACM34042.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
scnpilot_p_inoc_scaffold_864_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32737..33987
DNA (1251bp) protein (417aa)
leucine/isoleucine/valine transporter permease subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E38D7 rbh
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:GAD24362.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
livM; leucine/isoleucine/valine transporter permease subunit
scnpilot_p_inoc_scaffold_864_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33984..34751
DNA (768bp) protein (256aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000374AB15 rbh
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:GAD24363.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
livG; leucine/isoleucine/valine transporter ATP-binding subunit
Displaying items 1-30 of 33 in total

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