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scnpilot_p_inoc_scaffold_987

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_987_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
Succinyl-CoA ligase [ADP-forming] subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TXT3_ALIDB
scnpilot_p_inoc_scaffold_987_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

245..1048
DNA (804bp) protein (268aa)
Protein serine/threonine phosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW7_ALIDK
protein phosphatase 2C
Protein phosphatase 2C-like protein {ECO:0000313|EMBL:ADV01964.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
scnpilot_p_inoc_scaffold_987_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1072..1692
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F4F4D
FOG: FHA domain {ECO:0000313|EMBL:GAD22885.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
FHA domain-containing protein
scnpilot_p_inoc_scaffold_987_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1709..2500
DNA (792bp) protein (264aa)
Cyclic-AMP phosphodiesterase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW5_ALIDK
cyclic-AMP phosphodiesterase
Cyclic-AMP phosphodiesterase {ECO:0000313|EMBL:AEB86903.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
scnpilot_p_inoc_scaffold_987_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2463..3473)
DNA (1011bp) protein (337aa)
UDP-glucose 4-epimerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW0_9GAMM
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EIL92751.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
scnpilot_p_inoc_scaffold_987_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3470..6211)
DNA (2742bp) protein (914aa)
methionine synthase (EC:2.1.1.13)
Methionine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT21_ALIDB
5-methyltetrahydrofolate-homocysteine methyltransferase {ECO:0000313|EMBL:GAO21597.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
scnpilot_p_inoc_scaffold_987_7
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6417..7580)
DNA (1164bp) protein (388aa)
Bll6424 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89GC1_BRADU
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:KEA63092.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;
hypothetical protein
scnpilot_p_inoc_scaffold_987_8
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7774..8646)
DNA (873bp) protein (291aa)
Ureidoglycolate lyase (EC:4.3.2.3)
Ureidoglycolate lyase {ECO:0000313|EMBL:ADX57769.1}; EC=4.3.2.3 {ECO:0000313|EMBL:ADX57769.1};; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036FF5CD rbh
scnpilot_p_inoc_scaffold_987_9
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8657..10240)
DNA (1584bp) protein (528aa)
monooxygenase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00036ECE56 rbh
FAD binding domain protein rbh
FAD binding domain protein {ECO:0000313|EMBL:AIO35166.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia compl
scnpilot_p_inoc_scaffold_987_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10242..11108)
DNA (867bp) protein (289aa)
glyoxalase n=1 Tax=Sphingomonas wittichii RepID=UPI0002E64C21
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABQ69396.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
scnpilot_p_inoc_scaffold_987_11
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11241..12098)
DNA (858bp) protein (286aa)
Putative meta-cleavage compound hydrolase n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5TWR5_9ACTO
alpha/beta hydrolase family protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AHH18488.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
scnpilot_p_inoc_scaffold_987_12
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12253..12912)
DNA (660bp) protein (220aa)
TetR family transcriptional regulator n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXM4_9BURK
Putative HTH-type transcriptional regulator YvdT {ECO:0000313|EMBL:EWS64945.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;"
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_987_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12965..13972)
DNA (1008bp) protein (336aa)
(2Fe-2S)-binding protein n=1 Tax=Acidovorax avenae RepID=UPI000364EC59
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ABX34783.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovoran
scnpilot_p_inoc_scaffold_987_14
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14029..15228)
DNA (1200bp) protein (400aa)
Putative lipoprotein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDX9_METPP
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABM93768.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).
scnpilot_p_inoc_scaffold_987_15
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15325..15576
DNA (252bp) protein (84aa)
transglycosylase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395AE42
transglycosylase-associated protein
Transglycosylase-associated protein {ECO:0000313|EMBL:ABM33399.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
scnpilot_p_inoc_scaffold_987_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15678..16430)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375216
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AFU43940.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_987_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16439..18616)
DNA (2178bp) protein (726aa)
ATP-dependent DNA helicase DinG n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003706342
Rad3-related DNA helicases {ECO:0000313|EMBL:GAD21232.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-
helicase c2
scnpilot_p_inoc_scaffold_987_18
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19087..19992)
DNA (906bp) protein (302aa)
Prophage antirepressor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RJ9_RHOFD
prophage antirepressor
Prophage antirepressor {ECO:0000313|EMBL:ABD71604.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducen
scnpilot_p_inoc_scaffold_987_19

Not on your lists

20174..20362
DNA (189bp) protein (63aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T0Y1B6_9ZZZZ
Transposase IS4 family protein {ECO:0000313|EMBL:EQD75782.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS4 family transposase
scnpilot_p_inoc_scaffold_987_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20745..23078
DNA (2334bp) protein (778aa)
malic enzyme (EC:1.1.1.40)
malic enzyme n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D4F28
Malic enzyme {ECO:0000313|EMBL:GAD21176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_p_inoc_scaffold_987_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23243..23644
DNA (402bp) protein (134aa)
Guanine-specific ribonuclease N1 and T1 n=2 Tax=Acidovorax RepID=A1WD84_ACISJ
guanine-specific ribonuclease n1 and t1
Guanine-specific ribonuclease N1 and T1 {ECO:0000313|EMBL:ACM34892.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
scnpilot_p_inoc_scaffold_987_22
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23767..24186
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1WD85_ACISJ
barstar (barnase inhibitor)
Uncharacterized protein {ECO:0000313|EMBL:ABM44210.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_p_inoc_scaffold_987_23
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24476..25249)
DNA (774bp) protein (258aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00275485};; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobac
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Alicycliphilus denitrificans RepID=E8TYR6_ALIDB
dimethyladenosine transferase
scnpilot_p_inoc_scaffold_987_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25257..26666)
DNA (1410bp) protein (470aa)
Chaperone SurA n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYR7_ALIDB
sura domain-containing protein
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01
scnpilot_p_inoc_scaffold_987_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26726..29107)
DNA (2382bp) protein (794aa)
LPS-assembly protein LptD n=2 Tax=Acidovorax sp. (strain JS42) RepID=LPTD_ACISJ
LPS-assembly protein LptD {ECO:0000255|HAMAP-Rule:MF_01411}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
organic solvent tolerance protein
scnpilot_p_inoc_scaffold_987_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29110..30303
DNA (1194bp) protein (398aa)
Aminoglycoside phosphotransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBT9_ALIDK rbh
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEB87010.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
scnpilot_p_inoc_scaffold_987_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30358..31065
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
16S rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000362171C rbh
hypothetical protein
scnpilot_p_inoc_scaffold_987_28
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31098..31940)
DNA (843bp) protein (281aa)
Alpha/beta hydrolase fold protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIG5_ACIET
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACM34903.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax e
scnpilot_p_inoc_scaffold_987_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32014..32703
DNA (690bp) protein (230aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:AEB86955.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AEB86955.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
Riboflavin synthase, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBN4_ALIDK
scnpilot_p_inoc_scaffold_987_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32785..33219)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CQV4_PSEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM32461.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
Displaying items 1-30 of 40 in total

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