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scnpilot_p_inoc_scaffold_1096

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1096_1
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..133
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:EGJ11714.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC
scnpilot_p_inoc_scaffold_1096_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(196..1572)
DNA (1377bp) protein (459aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370E6E9
glutamate-1-semialdehyde-2,1-aminomutase
scnpilot_p_inoc_scaffold_1096_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1715..2119
DNA (405bp) protein (135aa)
Response regulator receiver protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF65_ACIET
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACM34335.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_1096_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2119..2484
DNA (366bp) protein (122aa)
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH id=12550037 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
response regulator receiver protein; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
response regulator receiver protein
scnpilot_p_inoc_scaffold_1096_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2536..3030
DNA (495bp) protein (165aa)
Putative CheW protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBR3_ACISJ
putative CheW protein
Putative CheW protein {ECO:0000313|EMBL:ABM43688.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain J
scnpilot_p_inoc_scaffold_1096_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3067..5283
DNA (2217bp) protein (739aa)
chemotaxis protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003664468
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAD23739.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_1096_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5328..11051
DNA (5724bp) protein (1908aa)
CheA signal transduction histidine kinases n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YP4_RHOFD
CheA signal transduction histidine kinase
CheA signal transduction histidine kinases {ECO:0000313|EMBL:ABD69109.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rho
scnpilot_p_inoc_scaffold_1096_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11141..12313
DNA (1173bp) protein (391aa)
Twitching motility protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T541_ACIDE
Twitching motility protein {ECO:0000313|EMBL:EER60408.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafiel
twitching motility protein
scnpilot_p_inoc_scaffold_1096_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12378..13019
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D8E1A
hypothetical protein
UPF0301 protein AVS7_03497 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_1096_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13016..13423
DNA (408bp) protein (136aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=535289 specie
Putative Holliday junction resolvase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WBQ9_ACISJ
holliday junction resolvase-like protein
scnpilot_p_inoc_scaffold_1096_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13420..13929
DNA (510bp) protein (170aa)
Phosphoribosyltransferase n=2 Tax=Acidovorax RepID=A1WBQ8_ACISJ
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ABM43683.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (stra
scnpilot_p_inoc_scaffold_1096_12
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13932..14894
DNA (963bp) protein (321aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=643561 species="Bac
Aspartate carbamoyltransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9H5_ACIAP
scnpilot_p_inoc_scaffold_1096_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14962..16254
DNA (1293bp) protein (431aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1268622 species="Bacteria; Proteobacteria; Betap
Allantoinase (EC:3.5.2.5)
dihydroorotase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DF162
scnpilot_p_inoc_scaffold_1096_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16289..16636
DNA (348bp) protein (116aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
Arsenate reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF51_ACIET
arsenate reductase
scnpilot_p_inoc_scaffold_1096_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16636..17697
DNA (1062bp) protein (354aa)
dihydroorotase, homodimeric type (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU00
Dihydroorotase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS13_ALIDB
scnpilot_p_inoc_scaffold_1096_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17841..18737
DNA (897bp) protein (299aa)
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AFAB2
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACM32068.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
scnpilot_p_inoc_scaffold_1096_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18840..19598
DNA (759bp) protein (253aa)
glutamate ABC transporter permease n=1 Tax=Brachymonas chironomi RepID=UPI00037F2F2E
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEB83066.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
scnpilot_p_inoc_scaffold_1096_18
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19600..20268
DNA (669bp) protein (223aa)
glutamate/aspartate transporter permease GltK n=1 Tax=Variovorax paradoxus RepID=UPI00035DD852
polar amino acid ABC transporter permease
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADX47876.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.
scnpilot_p_inoc_scaffold_1096_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20280..21029
DNA (750bp) protein (250aa)
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003788D3E
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACS17484.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
scnpilot_p_inoc_scaffold_1096_20

Not on your lists

comp(21123..22079)
DNA (957bp) protein (319aa)
Glycosyl transferase n=1 Tax=uncultured bacterium RepID=C6L1A0_9BACT
Glycosyl transferase {ECO:0000313|EMBL:BAH90519.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
family 2 glycosyl transferase
scnpilot_p_inoc_scaffold_1096_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22091..22483)
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4U4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20323.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
scnpilot_p_inoc_scaffold_1096_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22485..23873)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0003765A8A rbh
Putative membrane protein {ECO:0000313|EMBL:KFJ14281.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pse
hypothetical protein
scnpilot_p_inoc_scaffold_1096_23
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23870..24946)
DNA (1077bp) protein (359aa)
Putative o-antigen acetylase n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JAN2_9BURK
Acyltransferase 3 {ECO:0000313|EMBL:EZP57867.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
acyltransferase 3
scnpilot_p_inoc_scaffold_1096_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24946..26571)
DNA (1626bp) protein (542aa)
Peptide chain release factor 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G640_ALIDK
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=596154 species="Bacteria; Proteobacteria; Betaprot
scnpilot_p_inoc_scaffold_1096_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26892..27164)
DNA (273bp) protein (91aa)
addiction module antitoxin n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036C6CBE
addiction module antidote protein, CC2985 family Tax=CG_Rhodof_04
addiction module antidote protein, CC2985 family
scnpilot_p_inoc_scaffold_1096_26
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27380..28006
DNA (627bp) protein (209aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000255|HAMAP-Rule:MF_00563}; EC=3.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00563};; S-adenosyl-L-homocysteine hydrolase {ECO:0000255|HAMAP-Rule:MF_00563}; Short=AdoHcyase {ECO:000
Adenosylhomocysteinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=SAHH_ACIAC
Displaying 26 items

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