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scnpilot_p_inoc_scaffold_1495

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1495_1
Marinobacter sp. EVN1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..673
DNA (672bp) protein (224aa)
Alcohol dehydrogenase n=1 Tax=Marinobacter sp. EVN1 RepID=U7NHJ1_9ALTE
Alcohol dehydrogenase {ECO:0000313|EMBL:ERS82787.1}; TaxID=1397532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. E
yhdH; biotin carboxylase
scnpilot_p_inoc_scaffold_1495_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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697..1869
DNA (1173bp) protein (391aa)
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3)
L-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEB83644.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AEB83644.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
L-lactate dehydrogenase (Cytochrome) n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA8_ALIDB
scnpilot_p_inoc_scaffold_1495_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1924..3117
DNA (1194bp) protein (398aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1268622 species="Bacteria; Proteobacteria; Be
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000377BA27 rbh
scnpilot_p_inoc_scaffold_1495_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3263..4819
DNA (1557bp) protein (519aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WAZ2_ACISJ
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABM43417.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
scnpilot_p_inoc_scaffold_1495_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4827..5672)
DNA (846bp) protein (282aa)
queF; 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
queF; 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] id=12549865 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
scnpilot_p_inoc_scaffold_1495_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5766..6614)
DNA (849bp) protein (283aa)
procollagen-proline dioxygenase (EC:1.14.11.2)
Procollagen-proline dioxygenase {ECO:0000313|EMBL:ACM34081.1}; EC=1.14.11.2 {ECO:0000313|EMBL:ACM34081.1};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
Procollagen-proline dioxygenase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDS2_ACIET rbh
scnpilot_p_inoc_scaffold_1495_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6611..7390)
DNA (780bp) protein (260aa)
UPF0246 protein Dtpsy_2644 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDS0_ACIET
hypothetical protein
UPF0246 protein Dtpsy_2644 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebre
scnpilot_p_inoc_scaffold_1495_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7550..10411)
DNA (2862bp) protein (954aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1603291 species="Bacteria; Proteobacteria; Be
Ribonuclease E n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ97_ALIDB
ribonuclease, rne/rng family
scnpilot_p_inoc_scaffold_1495_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10930..11916
DNA (987bp) protein (329aa)
Pseudouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR8_ACIET
pseudouridine synthase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
RluA family pseudouridine synthase
scnpilot_p_inoc_scaffold_1495_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11913..12581
DNA (669bp) protein (223aa)
HAD family hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003742DD6
Predicted phosphatases {ECO:0000313|EMBL:GAD22419.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;
had-superfamily hydrolase
scnpilot_p_inoc_scaffold_1495_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12581..12961
DNA (381bp) protein (127aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ94_ALIDB
HAD-superfamily hydrolase {ECO:0000313|EMBL:GAO24498.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
rieske (2fe-2S) iron-sulfur domain-containing protein
scnpilot_p_inoc_scaffold_1495_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12966..14015
DNA (1050bp) protein (350aa)
Peptidase S49 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDR5_ACIET
peptidase s49
Peptidase S49 {ECO:0000313|EMBL:ACM34074.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY)
scnpilot_p_inoc_scaffold_1495_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14044..14826)
DNA (783bp) protein (261aa)
enoyl-CoA hydratase n=1 Tax=Curvibacter lanceolatus RepID=UPI000378CAF8
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACS18428.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad
scnpilot_p_inoc_scaffold_1495_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14827..15597)
DNA (771bp) protein (257aa)
uroporphyrin-III methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D332B
Predicted methyltransferases {ECO:0000313|EMBL:GAD22415.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
uroporphyrin-III C/tetrapyrrole methyltransferase
scnpilot_p_inoc_scaffold_1495_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15594..16193)
DNA (600bp) protein (200aa)
septum formation protein Maf n=1 Tax=Acidovorax radicis RepID=UPI0002376695
maf protein
Maf-like protein Alide2_1257 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
scnpilot_p_inoc_scaffold_1495_16
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16219..16770
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0003812BE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM31772.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
scnpilot_p_inoc_scaffold_1495_17
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16883..17074
DNA (192bp) protein (64aa)
50S ribosomal protein L32 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKU4_9BURK
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenopha
rpmF; 50S ribosomal protein L32
scnpilot_p_inoc_scaffold_1495_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17214..18269
DNA (1056bp) protein (352aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=PLSX_ACIET
glycerol-3-phosphate acyltransferase plsx
scnpilot_p_inoc_scaffold_1495_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18269..19249
DNA (981bp) protein (327aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Alicycliphilus denitrificans RepID=E8TYL0_ALIDB
scnpilot_p_inoc_scaffold_1495_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19303..19917
DNA (615bp) protein (205aa)
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Alicycliphilus denitrificans RepID=E8TYK9_ALIDB
Displaying 20 items

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