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scnpilot_p_inoc_scaffold_1789

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1789_1
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..190)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003779B2D
Uncharacterized protein {ECO:0000313|EMBL:ESX59762.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
scnpilot_p_inoc_scaffold_1789_2
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(202..471)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Serratia plymuthica PRI-2C RepID=I3AL24_SERPL
Uncharacterized protein {ECO:0000313|EMBL:EIJ19817.1}; TaxID=1154756 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuth
hypothetical protein
scnpilot_p_inoc_scaffold_1789_3
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(510..1115)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZAQ8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO89269.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lo
scnpilot_p_inoc_scaffold_1789_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1140..1913)
DNA (774bp) protein (258aa)
short chain dehydrogenase id=12497461 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENO84585.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera li
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_1789_5
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2139..3059
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E760_9BURK rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKZ95429.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_1789_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3099..3551
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZG0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83592.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_1789_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3573..5018
DNA (1446bp) protein (482aa)
coniferyl-aldehyde dehydrogenase (EC:1.2.1.68)
Aldehyde dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZF9_ALIDB
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
scnpilot_p_inoc_scaffold_1789_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5113..5634
DNA (522bp) protein (174aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7C9_9BURK
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:GAD24274.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_1789_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5750..6370)
DNA (621bp) protein (207aa)
riboflavin biosynthesis protein ribd (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDG8_ACIET
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_1789_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6380..6862)
DNA (483bp) protein (161aa)
riboflavin biosynthesis protein ribd (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDG8_ACIET
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_p_inoc_scaffold_1789_11
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6903..7532)
DNA (630bp) protein (210aa)
Tfp pilus assembly protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375057
general secretion pathway, GspH; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
general secretion pathway, GspH
scnpilot_p_inoc_scaffold_1789_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7942..12378)
DNA (4437bp) protein (1479aa)
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein n=2 Tax=Comamonas testosteroni RepID=B7WRV8_COMTE rbh
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein {ECO:0000313|EMBL:EED69012.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
scnpilot_p_inoc_scaffold_1789_13
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12396..13025)
DNA (630bp) protein (210aa)
Putative transmembrane protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLQ5_VEREI
hypothetical protein; K02673 type IV pilus assembly protein PilX Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1789_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13041..14099)
DNA (1059bp) protein (353aa)
Putative transmembrane protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRV7_COMTE
Putative transmembrane protein {ECO:0000313|EMBL:EED69011.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" sourc
hypothetical protein
scnpilot_p_inoc_scaffold_1789_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14096..14713)
DNA (618bp) protein (206aa)
Type IV pilus modification protein PilV n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRV6_COMTE
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EED69010.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas
type IV pilus modification protein PilV
scnpilot_p_inoc_scaffold_1789_16
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14799..15017
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSK0_PUSST
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:EZP55244.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia
hypothetical protein
scnpilot_p_inoc_scaffold_1789_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15536..15814
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WFX2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37075.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_1789_18
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15789..16091
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XB45_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH11375.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
Displaying 18 items

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