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scnpilot_p_inoc_scaffold_1098_24

Organism: SCNpilot_P_inoc_Burkholderiales_66_5

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 11 / 38
Location: 23034..24191

Top 3 Functional Annotations

Value Algorithm Source
type III secretion protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375FC9C similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 385.0
  • Bit_score: 498
  • Evalue 7.50e-138
Flagellar biosynthesis pathway, component FlhB {ECO:0000313|EMBL:GAD23904.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 385.0
  • Bit_score: 498
  • Evalue 1.10e-137
type III secretion exporter similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 380.0
  • Bit_score: 497
  • Evalue 2.80e-138

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Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGGACTCCAGCGAAGACAAACAACTACCGGCAACGGAGCGCAGGCTCCAGAAAGCGCGCGAAGACGGGCAGGCCCCGCGTTCGCAGGAACTGGCGCATCTGGCGGTCCTGGGGGTTCTCGGCCTCATTCTCTGGACCTTCTTCCCGACACTGATCGACGTGCTTTTGCGCGGGATGACGTGGCAGTTCACCTTCGATGCCGCCACCGTGCATGTGCCGGCCAGCATGCTGGCGCGCCTGCGGCCCATGCTGCTGGCGGGTCTGGTGATCAGCCTGATCCTGGCGGTGCTGGCAGCGCTGGCGGCGGTCACTGCCAGCCTGGGCTCGGGCGGCTGGATCTGGAGCCTGAAGGCGCTGCAGCCGCAGTTCAGCCGATTGAGCCCGTTGCAGGGCGCCAAGAACCTGGTGTCCAAGCAGAAGATGGCCAACCTCGGCAAGATGCTGCTGCTGGCCACGGTACTCGTCTGGGCGGCGTGGAAATACATGTCCGGCAGCGCCGAGAAGATGGCGCAGCTGGTGCTGCAGCCCAGTGCCCCGTCGCTGCGCGAGGCGGGCCAATGGATGGGCACCGGCCTGGCCTTGCTGCTGCTGGTGGTGTTCCTGTTTGCCGTGGTGGACGTGCCGCTGCAGCAGTACCTGCACAAATCGCGCCTGAAGATGAGCCATGAGGAGGTGAAGCAGGAGCACAAGGATTCCGACGGCAATCCGCTGATCAAGCGGCGCATCCGCCAGAAGCAGCGCGAGGTGGCCGAGCGCGCCAGCGTGCGGCGCGTGCCCGAGGCGGATTTTGTCGTGATGAACCCGACGCACTACGCGGTGGCGCTGCGCTACGACGACGCCACGATGAGCGCGCCGCAGGTGATTTCCAAGGGAACGGATCTGGTGGCCTTGCGCATCCGCGATCTGGCCACCGAGCACAAGGTACCGGTGCTGCGCTCGCCCATGCTGGCGCGCGCGCTCTACGCCCATGCCGATCTGGAGCAGCCGATCCCGGCGCAGCTCTACACTGCGGTGGCGCAGGTGCTGGCCTATGTCTACCGCCTCAAGGCGGCGCTGCGCGGCGAGGCGCGCATGCCCGACGCCGAGCCGATCCCCGACGCGCACATTCCGCCGGAACTCGACCCCCATTCGCCGCGGGCCGGACACGCCACCAGGTAG
PROTEIN sequence
Length: 386
MDSSEDKQLPATERRLQKAREDGQAPRSQELAHLAVLGVLGLILWTFFPTLIDVLLRGMTWQFTFDAATVHVPASMLARLRPMLLAGLVISLILAVLAALAAVTASLGSGGWIWSLKALQPQFSRLSPLQGAKNLVSKQKMANLGKMLLLATVLVWAAWKYMSGSAEKMAQLVLQPSAPSLREAGQWMGTGLALLLLVVFLFAVVDVPLQQYLHKSRLKMSHEEVKQEHKDSDGNPLIKRRIRQKQREVAERASVRRVPEADFVVMNPTHYAVALRYDDATMSAPQVISKGTDLVALRIRDLATEHKVPVLRSPMLARALYAHADLEQPIPAQLYTAVAQVLAYVYRLKAALRGEARMPDAEPIPDAHIPPELDPHSPRAGHATR*