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scnpilot_p_inoc_scaffold_1098

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1098_1
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1624)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030C6009 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF70723.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1098_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1732..4044)
DNA (2313bp) protein (771aa)
TonB-dependent receptor n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3D9_ACISJ
TonB-dependent receptor {ECO:0000313|EMBL:ABM40764.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
TonB-dependent receptor
scnpilot_p_inoc_scaffold_1098_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4218..5111)
DNA (894bp) protein (298aa)
Beta-lactamase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3E0_ACISJ
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABM40765.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (
scnpilot_p_inoc_scaffold_1098_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5346..6995
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FAFDE5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD36186.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_1098_5
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6992..8143
DNA (1152bp) protein (384aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQ37_DELAS rbh
Aminotransferase DegT {ECO:0000313|EMBL:EXU80359.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA187
DegT/DnrJ/EryC1/StrS aminotransferase
scnpilot_p_inoc_scaffold_1098_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8153..8785)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=A6V999_PSEA7
Uncharacterized protein {ECO:0000313|EMBL:ETU92293.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
scnpilot_p_inoc_scaffold_1098_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8782..9954)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=V4R063_PSEAI rbh
Rieske family iron-sulfur cluster-binding protein
Rieske family iron-sulfur cluster-binding protein {ECO:0000313|EMBL:KFF33910.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
scnpilot_p_inoc_scaffold_1098_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9951..11135)
DNA (1185bp) protein (395aa)
Methyltransferase, FkbM family protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V9A1_PSEA7 rbh
methyltransferase, FkbM family protein
Methyltransferase, FkbM family protein {ECO:0000313|EMBL:ABR85855.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
scnpilot_p_inoc_scaffold_1098_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11128..11763)
DNA (636bp) protein (212aa)
Acetyltransferase n=2 Tax=Pseudomonas aeruginosa RepID=A6V9A2_PSEA7
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:KFF33912.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
scnpilot_p_inoc_scaffold_1098_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11771..12517)
DNA (747bp) protein (249aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Pseudomonas aeruginosa RepID=A6V9A3_PSEA7 rbh
short chain dehydrogenase/reductase family oxidoreductase rbh
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ABR81796.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudo
scnpilot_p_inoc_scaffold_1098_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12546..12950)
DNA (405bp) protein (135aa)
Ribonuclease VapC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTK0_POLNA
PilT domain-containing protein; K07062 Tax=CG_Rhodof_02
PilT domain-containing protein
scnpilot_p_inoc_scaffold_1098_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12964..13203)
DNA (240bp) protein (80aa)
SpoVT/AbrB protein n=1 Tax=uncultured bacterium RepID=K2CY01_9BACT
SpoVT/AbrB domain-containing protein Tax=CG_Rhodof_02
SpoVT/AbrB domain-containing protein
scnpilot_p_inoc_scaffold_1098_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13280..14317)
DNA (1038bp) protein (346aa)
beta-ketoacyl-acyl-carrier-protein synthase I (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAF7_DELAC rbh
3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000313|EMBL:EPD36176.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del
scnpilot_p_inoc_scaffold_1098_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14323..14550)
DNA (228bp) protein (76aa)
acyl carrier protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F6DF24
acyl carrier protein-like protein
Acyl carrier protein-related protein {ECO:0000313|EMBL:ABX33261.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
scnpilot_p_inoc_scaffold_1098_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14650..15879)
DNA (1230bp) protein (410aa)
fliC; flagellin-related hook-associated protein; K02406 flagellin id=12553378 bin=BDI species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
fliC; flagellin-related hook-associated protein; K02406 flagellin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
flagellin
scnpilot_p_inoc_scaffold_1098_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16207..17481
DNA (1275bp) protein (425aa)
fliC; flagellin-related hook-associated protein; K02406 flagellin id=12553377 bin=BDI species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
flagellin
fliC; flagellin-related hook-associated protein; K02406 flagellin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1098_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17662..18993
DNA (1332bp) protein (444aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ44651.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
flagellar hook-associated 2 domain-containing protein; K02407 flagellar hook-associated protein 2 id=12553376 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_1098_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19080..19493
DNA (414bp) protein (138aa)
flagellar biosynthesis protein FliS
Flagellar biosynthesis protein FliS {ECO:0000313|EMBL:AIJ44650.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas
flagellar protein FliS; K02422 flagellar protein FliS id=12553375 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_1098_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19497..19796
DNA (300bp) protein (100aa)
Flagellar protein FliT n=2 Tax=Comamonas testosteroni RepID=B7WY01_COMTE
flagellar export protein FliJ
Flagellar export protein FliJ {ECO:0000313|EMBL:KGH29187.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testostero
scnpilot_p_inoc_scaffold_1098_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19918..20778
DNA (861bp) protein (287aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TSX3_ALIDB
flagellar motor stator protein MotA
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ADV01574.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
scnpilot_p_inoc_scaffold_1098_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20807..21766
DNA (960bp) protein (320aa)
OmpA/MotB domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGC7_ACIET
ompa/motb domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ACM34522.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (st
scnpilot_p_inoc_scaffold_1098_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21880..22227
DNA (348bp) protein (116aa)
Response regulator receiver protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWE3_9BURK
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADX48189.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_p_inoc_scaffold_1098_23
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22224..22859
DNA (636bp) protein (212aa)
Protein phosphatase CheZ {ECO:0000256|PIRNR:PIRNR002884}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR002884};; Chemotaxis protein CheZ {ECO:0000256|PIRNR:PIRNR002884}; TaxID=535289 species="Bacteria; Proteoba
Protein phosphatase CheZ n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MGC9_ACIET
chemotaxis phosphatase, Chez
scnpilot_p_inoc_scaffold_1098_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23034..24191
DNA (1158bp) protein (386aa)
type III secretion protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375FC9C
Flagellar biosynthesis pathway, component FlhB {ECO:0000313|EMBL:GAD23904.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source
type III secretion exporter
scnpilot_p_inoc_scaffold_1098_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24198..26282
DNA (2085bp) protein (695aa)
flagellar biosynthesis protein FlhA n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036761F2
Flagellar biosynthesis protein flha {ECO:0000313|EMBL:GAD23903.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
flagellar biosynthesis protein FlhA
scnpilot_p_inoc_scaffold_1098_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26279..27778
DNA (1500bp) protein (500aa)
flagellar biosynthetic protein FlhF n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003782981
Flagellar GTP-binding protein {ECO:0000313|EMBL:GAD23902.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
ATPase AAA
scnpilot_p_inoc_scaffold_1098_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27768..27932
DNA (165bp) protein (55aa)
UPI0003D3E99B related cluster n=1 Tax=unknown RepID=UPI0003D3E99B
Uncharacterized protein {ECO:0000313|EMBL:GAD23901.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
Displaying 27 items

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