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scnpilot_p_inoc_scaffold_4159_3

Organism: SCNpilot_P_inoc_Burkholderiales_66_5

near complete RP 49 / 55 MC: 1 BSCG 48 / 51 MC: 2 ASCG 11 / 38
Location: comp(813..1535)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDV1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 245.0
  • Bit_score: 472
  • Evalue 2.70e-130
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:KDD60135.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 245.0
  • Bit_score: 475
  • Evalue 5.90e-131
traG1; conjugal transfer coupling protein TraG similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 245.0
  • Bit_score: 472
  • Evalue 7.70e-131

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
GTGTTCCTCGGCCAGCACGACCGCCAGTACCTGCGGCATGAGGGGCCGGAACACGTCCTGACCTTCGCGCCCACGCGCTCGGGCAAGGGCGTCGGCCTAGTGGTGCCCACCTTGTTGAGCTGGCCGGCCTCGGCCGTCATCCACGACATCAAGGGCGAGAACTGGCAGATCACCGCCGGCTGGCGCAGCCGTTTCAGCCACTGCCTGCTGTTCAACCCCACGGATGCGAAGTCGGCAGCGTACAACCCGCTGCTGGAGGTCCGGCGCGGCGCGCATGAGGTGCGCGACGTGCAGAACATTGCGGACATCCTGGTCGATCCCGAAGGCGCGCTGGAGAAGCGCAACCATTGGGAAAAGACCAGCCACGCGCTGCTGGTCGGTGCCATCCTGCATGTGCTGTATGCCAGCGAGGACAAGACGCTGCGCGGCGTCGCCAACTTCCTCAGCGACCCGGCCAGCCCGTTCGAGCTGACCTTGCATCGGATGATGACCACGCCCCACCTGGGCGATGGCCCGCATCCCGTCGTCGCTTCGGCGGCGCGCGAAGTGCTCAACAAGTCGGACAACGAGCGTTCCGGCGTGTTGAGCACCGCCATGTCGTTCCTCGGCCTTTACCGTGATCCGACGGTGGCCGAAGTCACCTCGCGCTGCGACTGGCGTATCGCCGACCTCATTTCCGCCGAACACCCCGTGCCGTCGCCGTGTTCGCGAGCTGCCCTCTAG
PROTEIN sequence
Length: 241
VFLGQHDRQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDAKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALEKRNHWEKTSHALLVGAILHVLYASEDKTLRGVANFLSDPASPFELTLHRMMTTPHLGDGPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLISAEHPVPSPCSRAAL*