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scnpilot_p_inoc_scaffold_4159

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4159_1
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002D947E5
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KDD54124.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella
hypothetical protein
scnpilot_p_inoc_scaffold_4159_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125..724)
DNA (600bp) protein (200aa)
Genomic scaffold, R77_Final2 n=4 Tax=Proteobacteria RepID=K4TDB4_BORBO
Integrating conjugative element protein PilL, PFGI-1 class {ECO:0000313|EMBL:KDD54121.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetel
PilL protein
scnpilot_p_inoc_scaffold_4159_3
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(813..1535)
DNA (723bp) protein (241aa)
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDV1_PSEAI
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:KDD60135.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou
traG1; conjugal transfer coupling protein TraG
scnpilot_p_inoc_scaffold_4159_4
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1475..1891)
DNA (417bp) protein (139aa)
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDV1_PSEAI
conjugal transfer coupling protein TraG
Conjugal transfer protein TraG {ECO:0000313|EMBL:KFJ90863.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
scnpilot_p_inoc_scaffold_4159_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2109..2339)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIJ6_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34934.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_p_inoc_scaffold_4159_6
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2336..3280)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Thauera phenylacetica B4P RepID=N6Z262_9RHOO
LysR family transcriptional regulator {ECO:0000313|EMBL:ENO97940.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phen
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_4159_7
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..5323)
DNA (1947bp) protein (649aa)
Iron permease FTR1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X728_THIK1 rbh
Iron permease {ECO:0000313|EMBL:AJP48664.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
iron permease
scnpilot_p_inoc_scaffold_4159_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5343..6434)
DNA (1092bp) protein (364aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXD4_COMTE rbh
peptidase A8
scnpilot_p_inoc_scaffold_4159_9
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6431..8836)
DNA (2406bp) protein (802aa)
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:EXI77099.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EXI77099.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulib
Heavy metal translocating P-type ATPase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXD3_COMTE rbh
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
scnpilot_p_inoc_scaffold_4159_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8914..9339
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWK4_9GAMM
MerR family transcriptional regulator
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:ACL73882.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibr
scnpilot_p_inoc_scaffold_4159_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9519..9812)
DNA (294bp) protein (98aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=M3B7P9_PSEAI
hypothetical protein
Type VI secretion protein {ECO:0000313|EMBL:AKE69548.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin
scnpilot_p_inoc_scaffold_4159_12
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..11551)
DNA (819bp) protein (273aa)
integrase n=1 Tax=Dyella ginsengisoli RepID=UPI00034B0202 rbh
NODE_94, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97249.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
integrase core domain protein
scnpilot_p_inoc_scaffold_4159_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11551..11865)
DNA (315bp) protein (105aa)
transposase n=1 Tax=Dyella ginsengisoli RepID=UPI000348A623
ISXo8 transposase {ECO:0000313|EMBL:EHL21442.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
transposase
scnpilot_p_inoc_scaffold_4159_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11914..12321)
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEB85718.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
scnpilot_p_inoc_scaffold_4159_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12393..12743
DNA (351bp) protein (117aa)
Mercuric ion transport protein n=2 Tax=root RepID=Q934S7_ACIFR
Mercuric ion transport protein; K08363 mercuric ion transport protein Tax=CG_Rhodocyc_01
mercuric transport protein
scnpilot_p_inoc_scaffold_4159_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12756..13028
DNA (273bp) protein (91aa)
Mercuric transport protein periplasmic component n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y4_ALIDK
mercuric transport periplasmic protein
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycl
scnpilot_p_inoc_scaffold_4159_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13055..13477
DNA (423bp) protein (141aa)
MerC mercury resistance protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L023_HALNC
MerC mercury resistance protein
MerC mercury resistance protein {ECO:0000313|EMBL:ACX96046.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halot
scnpilot_p_inoc_scaffold_4159_18
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13516..14652
DNA (1137bp) protein (379aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; Flags: Fragment;; TaxID=303 species="Bacteria; Prote
merA; mercuric reductase (EC:1.16.1.1)
mercuric reductase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002DC3270
Displaying 18 items

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