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scnpilot_p_inoc_scaffold_3169

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3169_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UCE4_RHIRD
Myo-inositol catabolism protein {ECO:0000313|EMBL:KFL32749.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavin
hypothetical protein
scnpilot_p_inoc_scaffold_3169_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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259..1512
DNA (1254bp) protein (418aa)
NAD(FAD)-utilizing dehydrogenase n=1 Tax=Rhizobium giardinii RepID=UPI000371351D rbh
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KKB07421.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhate
dehydrogenase
scnpilot_p_inoc_scaffold_3169_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1519..2070)
DNA (552bp) protein (184aa)
DNA binding response regulator PrrA (RegA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J1_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB76372.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
DNA binding response regulator PrrA (RegA)
scnpilot_p_inoc_scaffold_3169_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2097..3425)
DNA (1329bp) protein (443aa)
Sensor histidine kinase PrrB (RegB) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J2_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08363.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sensor histidine kinase PrrB (RegB)
scnpilot_p_inoc_scaffold_3169_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3568..4020
DNA (453bp) protein (151aa)
Putative transmembrane protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8Z4_9BACT
Membrane protein {ECO:0000313|EMBL:KFL32311.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative cytosolic protein
scnpilot_p_inoc_scaffold_3169_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4089..4901)
DNA (813bp) protein (271aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U483_RHIRD
bacA; undecaprenyl pyrophosphate phosphatase, possible bacitracin resistance protein
scnpilot_p_inoc_scaffold_3169_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5008..5685
DNA (678bp) protein (226aa)
Glutathione S-transferase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R993_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07971.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glutathione S-transferase family protein
scnpilot_p_inoc_scaffold_3169_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5804..6937
DNA (1134bp) protein (378aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=429727 species
Iron-sulfur cluster-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R994_PELHB rbh
(Fe-S)-binding protein
scnpilot_p_inoc_scaffold_3169_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6937..7812
DNA (876bp) protein (292aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R995_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08357.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
nucleoside-diphosphate-sugar epimerase
scnpilot_p_inoc_scaffold_3169_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7809..8462
DNA (654bp) protein (218aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Rhizobium sp. AP16 RepID=J2DCU2_9RHIZ
GCN5 family acetyltransferase {ECO:0000313|EMBL:KFL30303.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.
acetyltransferase
scnpilot_p_inoc_scaffold_3169_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8478..9242)
DNA (765bp) protein (255aa)
2-hydroxymuconic semialdehyde hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08358.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
2-hydroxymuconic semialdehyde hydrolase
scnpilot_p_inoc_scaffold_3169_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9411..9935
DNA (525bp) protein (175aa)
Translation initiation factor IF-3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBP6_PELHB
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia ch
translation initiation factor 3
scnpilot_p_inoc_scaffold_3169_13
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10058..10354
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RYZ0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD87167.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
Displaying 13 items

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